Gene CPS_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1326 
SymbolpcaC 
ID3518925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1365619 
End bp1366008 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content38% 
IMG OID637283790 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_268069 
Protein GI71278474 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.171416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG AAAAACAAAA CGAGAATTAT AAAAATGGTG AGCAAGTTCG TCGTGAAGTA 
ATGGGAGATG AATTTGTTGA TCGTGCTTTA AATAATGCCA CTGAATTTGA CCAACCTTTA
CAAGATTTAG TCATGGAAAA TGCGTGGGGA AGTACTTGGA ATAGAAATGA CTTACCAAAA
GATACCCGAA GTTTAGTGAC TATCTCTATG TTAATCGCCC TAAAAGCACC GAATGAATTA
AAAGGTCATG TTCGTGGTGC ATTACGTAAT GGGGTAACTA AAGAAGAGAT TAGAGCGGTG
ATTATGCATG CGAGTGTTTA TTGTGGATTT CCTGCCGCTA TTGAAGCAAT GAGAGCGGCT
AAAGAAATTA TTGATACTTG GGAAGGGTGA
 
Protein sequence
MSSEKQNENY KNGEQVRREV MGDEFVDRAL NNATEFDQPL QDLVMENAWG STWNRNDLPK 
DTRSLVTISM LIALKAPNEL KGHVRGALRN GVTKEEIRAV IMHASVYCGF PAAIEAMRAA
KEIIDTWEG