| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1316 |
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| Symbol | |
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| ID | 3518572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1355497 |
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| End bp | 1356780 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283780 |
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| Product | putative peptidoglycan-binding protein |
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| Protein accession | YP_268059 |
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| Protein GI | 71278899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTCGT CAAACCGACT TATTAAAAAC ACACTCAATC TTGTTCATTT TAGAAAATTA
ATCATGCTAT GCGCATTATT TCCTTTATTA GCGAACGCCA CAATTGCCGA TGAGGATTTT
CTCCAGTGTA AAGTAAACTT AGCTAAACGC GCTGAAACCG CGGGGTTTTC ATCCTATATA
ACCCAAACCG TTATTGATAA TATTTCCCCC ATTAAGCGAG TGATTGCTTT AGATAAAAAA
CAACCTGAAT TTACCCAAAC CTTTGAGCAA TATATTAAAG CAAGAGTTAC CGATTATCAT
GTGCGAGTGG GAAAAGAGAA ACTAAAGAAA AATAAAAAAC TGTTTGATGC CTTAGAGAAA
AAATACGGCG TGCCACGCCA ATATTTAGTC TCTTTTTGGG GCTTAGAAAC AGTCTTTGGC
AAGCATAAAG GTAAAATGTC GGTACTTAAC TCTTTAGCCA CCTTAGCCTG TGATGAACGT
CGTAGTGAGT TTTTTACCCT AGAATTATTA AACTTATTCA CCTTAATTGA AACCAAGCAA
GTTGCTGTTG AACAACTGCA AGGCTCTTGG GCTGGTGCGA TGGGCCATAT GCAATTTATG
CCTACTGCCT TCTTAAAATA TGCCGTTGAT GGTGATAATG ATGGCAAAGT CGACATTTGG
AAAAGCGAGG TTGATGCCTT AACAACGGCG GCCAATTACT TAAATAAAAT CAGTTGGCAG
CCTAAAGAAC GCTGGGGCCG AGAAGTTAAA TTACCAACAA ACTTTGCCTT TGATAAAGTG
GCTTTTGATC AATATTACCC ACTTGATTAT TTTAAAGAAT TAGGCGTAAA AAAAACAAAT
AACCATTCAT TATCAACTTA TGACATTCAG GCTGAGCTAT ATCTACCTTC AGGCCATAAA
GGACCTGCAT TTTTACTCTA CCCTAATTTT AATGTGATTA TGACGTGGAA CCTTTCGAAA
AGTTATGCAC TGTCAGTAGG CTTATTAGCT AATAAATTAG TTGGCGCTAA AGGCATTGAG
TTTTCACACA AAGAGCAAAC TAACGTGAAA CCTTATAGTG TTGCACAGAT GAAAAACCTA
CAAAGCCAAC TCAATTCATT AGGCTTTGAA ACAGGTGAGC CTGATGGTAT CTGGGGACCT
AAAAGTAGAC AGGCCATTCG ATCATTTCAG CTGCAACATC AACTGATTGC TGATGGATAC
CCAAATAAAG AAGTTTTTGT CAAAATTAAC TTAGTGACTA ATAAAACCAG GGATAATATG
TCGAACATCA ATCAAGAGAG TTGA
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| Protein sequence | MLSSNRLIKN TLNLVHFRKL IMLCALFPLL ANATIADEDF LQCKVNLAKR AETAGFSSYI
TQTVIDNISP IKRVIALDKK QPEFTQTFEQ YIKARVTDYH VRVGKEKLKK NKKLFDALEK
KYGVPRQYLV SFWGLETVFG KHKGKMSVLN SLATLACDER RSEFFTLELL NLFTLIETKQ
VAVEQLQGSW AGAMGHMQFM PTAFLKYAVD GDNDGKVDIW KSEVDALTTA ANYLNKISWQ
PKERWGREVK LPTNFAFDKV AFDQYYPLDY FKELGVKKTN NHSLSTYDIQ AELYLPSGHK
GPAFLLYPNF NVIMTWNLSK SYALSVGLLA NKLVGAKGIE FSHKEQTNVK PYSVAQMKNL
QSQLNSLGFE TGEPDGIWGP KSRQAIRSFQ LQHQLIADGY PNKEVFVKIN LVTNKTRDNM
SNINQES
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