| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1304 |
|---|
| Symbol | |
|---|
| ID | 3522055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1344350 |
|---|
| End bp | 1345567 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637283768 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_268047 |
|---|
| Protein GI | 71281583 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.683581 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTATGA TGAAATATCG ACTCATCATG ATTAATCCGA TTGGTATAAC CACTATGTCA
CTATTCCGTA ATATCAAGCT CAAGATAAAG TTAGCCCGAA AAACGTTATC CATAATAGCC
TGTTGTACAC TTGTTCCTTT TGTTGCAAAT AGCAATGAAA CGTTACTGGC CAGCCTTAGT
CAATTTAATG AAAATATCAC GGCTAAATTA CACTTTGCTG ATAGCGGAAT ACCTTGGGGA
ATGGCGTGGT TACCTAATGG TGATTTATTA ATTACCCTGC GTGACGGCGA ATTAAAGAGG
CTAAAAAAAG GACAAAGCAT TGCTGACACA ATTTCCGACT TGCCAGAGAT AGCGGTTGGC
AGCCAAGGTG GTTTACTTGA TATCGCAGTA CATCCAGATT ATGCCAACAA TGGTTGGATA
TATTTTTCTT ACGCAAAAGA AGATAACAAA GGTAATAAAA GCACGGCGAT AATGCGAGCT
AAACTCAATG ACAAGATGCT AACCGACCAA GAAGATATTT ATGTCGCTCA AGCTTATGGT
AGAAAAGGTG TTCATTTTGG TAGTCGGTTA GTTTTTGATA ACCAAGGGTA TTTGTATTTC
TCTATTGGTG ACCGAGGTCA AAGAGATGTC AACCCTCAAG ACATTACACG CGATGCAGGC
AAGGTTTATC GATTACATGA TGATGGCCGT ATACCTGATG ACAATCCCTT TGTTAATAAT
GATAAAGCTA AAAAGGCTAT CTATTCCTAT GGTCACCGTA ATCCTCAAGG TATGGTTAAA
CACCCAATAA CTGGCGATAT TTGGACTCAT GAACATGGTC CACGTGGTGG TGATGAAGTT
AATCTTATCG GCAAAGGTAA AAACTACGGT TGGCCAATCA TTAGTTATGG TATTAACTAC
TCAGGTACTG AGATTACCGA CTTAACTCAA AAGAAAGGCA TGGAACAACC GTTATGGTAT
TGGGATCCTT CGATAGCACC TTCAGGTATG GCATTTGTAA CCAGTGATAA ATATCCTCAT
TGGCAGGGTA ATATACTGGT AGGCTCATTA AAGTTTGGCC AGATAGTTAT GGTTACTTTA
GCAGGAAATA AAGCTGTTAA GGCGGAAGTC GTTAAAGATG AACTTACACG AGTACGCAAC
ATTAAGCAGG GACCAGACGG CTATGTTTAT GTTGCGGTGG ATGGCCAAGG GATTTATAAA
TTAATACCGA AGCTTTAA
|
|---|
| Protein sequence | MIMMKYRLIM INPIGITTMS LFRNIKLKIK LARKTLSIIA CCTLVPFVAN SNETLLASLS
QFNENITAKL HFADSGIPWG MAWLPNGDLL ITLRDGELKR LKKGQSIADT ISDLPEIAVG
SQGGLLDIAV HPDYANNGWI YFSYAKEDNK GNKSTAIMRA KLNDKMLTDQ EDIYVAQAYG
RKGVHFGSRL VFDNQGYLYF SIGDRGQRDV NPQDITRDAG KVYRLHDDGR IPDDNPFVNN
DKAKKAIYSY GHRNPQGMVK HPITGDIWTH EHGPRGGDEV NLIGKGKNYG WPIISYGINY
SGTEITDLTQ KKGMEQPLWY WDPSIAPSGM AFVTSDKYPH WQGNILVGSL KFGQIVMVTL
AGNKAVKAEV VKDELTRVRN IKQGPDGYVY VAVDGQGIYK LIPKL
|
|---|
| |