| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1282 |
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| Symbol | |
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| ID | 3521580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1320261 |
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| End bp | 1321181 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283746 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_268025 |
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| Protein GI | 71281111 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.526163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATT CAGATTACAG TTTAATACCT ACATTCGTCG CCATTGTTGA AGAGAAAAGT
TATACAAAAG CAGCAAAACG TTTAGGCATT AGCCAATCGG CGGTAAGTCA GGGAGTAACC
AGGTTACAGG CTGTATTTAA AGATACTTTA TTTATACGTG GTAGCCGCGG AGTTGAACCA
ACTCAGTTTT CTCTTGATAT ATATCCTACA TTAGCAAGTT CAGTTGAAAA TATTGCCTTT
ATGATGCCTG AGTACAAAAA GTTCAGTGCT GTGAAATGTG AAAAACAATT CGTTATTTCA
TCGTTAAGTG TCTTTGGCTT TACTATATTA CCTCCGCTTT CAGCACTAAT GAGCCAGCAT
GCACCTTTGG CAAGTGTTAA AATTGAACCG CTTAATAATC ACGACTTTAC CAACATGTTG
AGATCACAGC ACTTTGATTT AGTTATTGAT GCTCACTCAA ACCAATATCC ACAGTTACGA
TCTAAAGTGA TAATGGAAGA TACTTTATGT GTAATGTGCC GTATTGATCA CCCAAGATTA
TCGGGTGATT CAATCAGTAT TGATGAATTT TTAGCGGAAA AGCATGTCAC CCATTCTCAG
CTTGATCAAA AGGGCGGTTA TCTAAGTGGT AAAGGTTTAA AAGAAGATGA GATATTAAAT
CAGCGCAAGA TAGCATGGCA GGCTGCTAGT ATTATGGAGA TGCTGCCTGT TATAGAGTGT
TGTGACTATA TTGCTTTGTT GCCACAAAGG TTAGTCGATA AATATCGTCA TATTTACCAA
CTAAAACAGT TACACAGTAA CTTTTTACTC GACCCTATAA AAGTAGCGAT GTACTGGCAT
TCATCAAGAA CAAATGATCC GAGTCATAAG TGGTTAAGAG AACAAATTGT TAAAGTAACC
CAACAGTTTA ATAAACTTTA G
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| Protein sequence | MKHSDYSLIP TFVAIVEEKS YTKAAKRLGI SQSAVSQGVT RLQAVFKDTL FIRGSRGVEP
TQFSLDIYPT LASSVENIAF MMPEYKKFSA VKCEKQFVIS SLSVFGFTIL PPLSALMSQH
APLASVKIEP LNNHDFTNML RSQHFDLVID AHSNQYPQLR SKVIMEDTLC VMCRIDHPRL
SGDSISIDEF LAEKHVTHSQ LDQKGGYLSG KGLKEDEILN QRKIAWQAAS IMEMLPVIEC
CDYIALLPQR LVDKYRHIYQ LKQLHSNFLL DPIKVAMYWH SSRTNDPSHK WLREQIVKVT
QQFNKL
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