Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1277 |
Symbol | |
ID | 3518891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1313828 |
End bp | 1314646 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637283741 |
Product | hypothetical protein |
Protein accession | YP_268020 |
Protein GI | 71278518 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.674192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTA TTTTTTTTCT GTTTTTATTT TATTCTGTAG CGTTAATGCC ATTGTACGGG AAAGCTAGCG ATAGAGTATT AGCCTATGTT GAGCGAATAC CGCCGTATGT ATTGATTAGT AATAATAATA TTACAGGCTC AACAATAGAT ATTTTAAATG AAGCCTTAAA AGAAAGTGAT GTTGATATAC ATTATCAAGA AATTAACTGG TCTAGAGCTT TACATGATAG CGAAAGTAGA CCAAATATCA TCTTAACAGG ACTTAATAGA AACGCCTTTC GAGAAGACAA ATTTCATTGG TTATATAAAG TGCCCGTTCA TACCAGTAGA CAACGATATT TTTTATGGCA ATTAAAAAGC AAATCTGCAG AGAATAAAAA AAGAGGCTTA AAGAATGCTT TTATCTCAGT GATGCAGGGT GATCATAAAA GTAAATCTTA TAAAAGTTAC GTTGAAGGTT TAGGCTACCA AGCCAATATT TATCCTGTAG GAAGCCGTGA ACAGGTTATT CATATGCTGT TTAAAGGGCG CGTAGATTAC ATACTTGGTG GTGAACTCAA TAACGCATGG AGAGTAAAAG GTTTGGGCTA TGACCCTGAT ATGATTGAGC GGGTAGTAGA GGTTCCAAAT ACGAGTCAAG GTTTATACAT AGCGATAGGA AAGCATACGG ATATTAAGTT TGTTAACAAA ATTAGAAAAG CGTTGGCTGA TTTAGAACAA AGTGGGAGAG TAAACGAGAT TATGTCACTA TGGTTGAAAA AGACTGAAAA AACGTCCCCA TCTGAGAATA CGCAAACAAA GCGTACAGTT GATGAATAA
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Protein sequence | MKSIFFLFLF YSVALMPLYG KASDRVLAYV ERIPPYVLIS NNNITGSTID ILNEALKESD VDIHYQEINW SRALHDSESR PNIILTGLNR NAFREDKFHW LYKVPVHTSR QRYFLWQLKS KSAENKKRGL KNAFISVMQG DHKSKSYKSY VEGLGYQANI YPVGSREQVI HMLFKGRVDY ILGGELNNAW RVKGLGYDPD MIERVVEVPN TSQGLYIAIG KHTDIKFVNK IRKALADLEQ SGRVNEIMSL WLKKTEKTSP SENTQTKRTV DE
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