| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1276 |
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| Symbol | gcvP1 |
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| ID | 3521561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1310695 |
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| End bp | 1313592 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283740 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_268019 |
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| Protein GI | 71281092 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCAA AAACAATTGT TAACTCATTA GCTGAGTTAG AGCAAACTCA AGATTTTATC
CGTCGCCACA TTGGCCCTAG TGAATCAGAA ACTCAAGCCA TGTTAAATGA CCTTGGTGTA
GAATCTGTTG ATGCGTTAAT TGATGAAATC GTACCAAGCG ATATTCGTCT TGCCGATCTT
CCAAATGTTG AAGAAAGTAA AACTGAAGTA CAAGCATTGG CAGATTTAAA AGCCGTAGCT
AGCTTAAATA AAGTGAATGA CACTTATATC GGTTTAGGTT ACTTCGGTAC CTTAACACCG
AACGTTATTT TACGTAACGT ACTAGAAAAT CCAGGTTGGT ATACAGCGTA TACGCCGTAC
CAGCCAGAAA TTGCTCAAGG TCGTTTAGAG TCATTATTAA ACTACCAACA AATGTGTATA
GACCTTACTG GTCTAGAGCT AGCTTCAGCT TCATTATTAG ATGAAGGTAC AGCAGCAGCA
GAAGCAATGG CATTAGCCAA ACGTGTTTCT AAAAACAAAA AATCAAACTT ATTCTTTATC
TCAGATGATG TTTACCCACA AACGATTGAC GTTGTTAAGC AACGTGCAGA AATGTTTGGT
TTTGACATTG TTGTTGCTCC AGCTGCAGAT GCTGCAGAAC ACGACATTTT CGGCGCACTT
ATCCAATACC CTGGCGCCTC AGGTCAAGTA ACAGATGTAA GTGAATTGAT TGCTAAAATT
CATGACAATA AAGGTATTGT TGCAGTAGCT GCTGACATCA TGAGCTTAGT ATTATTGAAG
TCTCCTGGTG AATTAGGCGC AGATGCTGTA ATTGGTTCAA GCCAACGCTT TGGTGTTCCA
ATGGGTTACG GTGGTCCACA CGCTGCATTC TTCACAACAT TAGATAAATA CAAACGTTCA
TTGCCTGGTC GTATTATCGG TGTTTCAAAA GACACACGCG GTAAAAACGC ACTACGTATG
GCTATGCAAA CACGTGAGCA ACATATACGT CGTGAAAAAG CCAACTCAAA CGTTTGTACA
GCGCAAGTAT TACTAGCCAA CATGGCAGCG TTCTACGCGG TTTACCACGG TCCTCAAGGT
TTAAAAACTA TTGCTAACCG TATTCACCGT TTAGCTGACA TTTTATGTTT AGGTACAGCA
ACTAAAGGCT TAACAGCTGT TCATGCTAAC TACTTCGACA CATTAACGTT TAACGTTGAT
AACAAAGACG AAATCGTTGC TCGTGCATTA GCTGCTAACG CTAACTTCCG CACAGACGTT
GACGGTCAAA TCTCAATCGC ATTAGATGAA ACCACAACAC GTGAAAACGT TGCACAACTT
TTTGATATCT TATTAGGTGA AGGTCACGGT CTAAACGTGA GCGACCTTGA TGACCAAATC
GTTGCTTCAG GTCACTCATC AATTCCAGCG TCATTAGTAC GTGAGTCAGC AATCTTAACT
CACCCAGTAT TTAACTCGTA CCACAGCGAA ACAGAAATGC TTCGTTATAT CAAAAGACTT
GAAAACAAAG ATTTAGCATT GAACCACTCA ATGATTTCTT TAGGTTCTTG TACGATGAAG
TTAAACGCAA CTGCACAAAT GATCCCAGTA TCATGGCCTG AATTTGCTAA CATGCATCCA
TTTGCACCAG TTAACCAAGC ACAAGGTTAC AAAGCAATGA TTGATGAGCT AGCCAAATGG
TTAGTAGAGT TAACGGGCTA CGACAAAATG TCAATGCAAC CTAACTCAGG TGCTCAAGGT
GAATACGCTG GCTTAATCGC TATCAGCAAG TATCACGAAA GCCGTGGTGA CTCGCATCGT
AACATTTGTT TAATTCCAGC ATCTGCTCAC GGTACCAACC CAGCATCAGC CATGATGGTT
GATATGAAAA TTGTTATCGT TGCTTGTGAT AAAGAAGGTA ACGTTGACAT GGCCGACTTA
AAAGCGAAAG CTGAAGAGTT AGCAGACAAC CTTGCATGTA TCATGATCAC TTACCCGTCT
ACTCACGGTG TATATGAAAC AACGATTGCA GAAATCTGTA ACATCATTCA TGACAATGGC
GGTCAAGTTT ACCTTGATGG CGCGAACATG AACGCACAAG TAGGTTTAAC TTCTCCAGGT
TTCATCGGTG CTGATGTTTC TCACCTTAAC TTGCACAAAA CATTCGCTAT TCCACATGGC
GGCGGCGGCC CAGGTATGGG ACCTATCGGC GTTAAGTCTC ACTTAGCACC ATTCTTGCCT
GATCATGCGT TAATTAACGT AGATGAAGCA ACTAAAGGTA ATGGCGCGGT TTCATCAGCT
CCTTTCGGTA GTGCTAGTAT TTTACCTATC ACTTACCTTT ACATTGCCTT GTTAGGTAAA
AAAGGTGTTA CTGACGCGAC TAAATACGCA ATTACTAACG CTAACTACGT ATCTAAAAAA
TTAAGCGAAC ATTACCCAAT TTTATATTCA GGTAAAAACG GCCGTGTTGC TCATGAGTGT
ATTGTTGATT TACGTCCGCT TAAAGCATCT TCAGGTGTTA CTGAAGTTGA TATGGCTAAA
CGCTTAATGG ATTACGGTTT CCATTCTCCA ACTATGTCGT TCCCAGTAGC GGGCACGTTC
ATGATTGAGC CAACGGAATC AGAATCTAAA GTTGAGCTTG ACCGTTTCAT CGAAGCAATG
GTTTGTATTC GTGATGAAGT ACGTAAAGTT GAATCAGGTG AGTGGGCATC AGATAACAAC
CCACTACACA ATGCACCACA TACATTAGCG GATATTACTG AACCATGGGA TCGTCCTTAC
TCGATTCAAG AAGCAGTATT CCCGGTAGTA GCAGTAACGG CTAACAAATT CTGGCCAACT
GTTAACCGTA TTGATGATGT ATTCGGAGAC AGAAACTTAA TTTGTTCATG TCCTCCAATC
GAAAGCTATA TTGACTAG
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| Protein sequence | MTSKTIVNSL AELEQTQDFI RRHIGPSESE TQAMLNDLGV ESVDALIDEI VPSDIRLADL
PNVEESKTEV QALADLKAVA SLNKVNDTYI GLGYFGTLTP NVILRNVLEN PGWYTAYTPY
QPEIAQGRLE SLLNYQQMCI DLTGLELASA SLLDEGTAAA EAMALAKRVS KNKKSNLFFI
SDDVYPQTID VVKQRAEMFG FDIVVAPAAD AAEHDIFGAL IQYPGASGQV TDVSELIAKI
HDNKGIVAVA ADIMSLVLLK SPGELGADAV IGSSQRFGVP MGYGGPHAAF FTTLDKYKRS
LPGRIIGVSK DTRGKNALRM AMQTREQHIR REKANSNVCT AQVLLANMAA FYAVYHGPQG
LKTIANRIHR LADILCLGTA TKGLTAVHAN YFDTLTFNVD NKDEIVARAL AANANFRTDV
DGQISIALDE TTTRENVAQL FDILLGEGHG LNVSDLDDQI VASGHSSIPA SLVRESAILT
HPVFNSYHSE TEMLRYIKRL ENKDLALNHS MISLGSCTMK LNATAQMIPV SWPEFANMHP
FAPVNQAQGY KAMIDELAKW LVELTGYDKM SMQPNSGAQG EYAGLIAISK YHESRGDSHR
NICLIPASAH GTNPASAMMV DMKIVIVACD KEGNVDMADL KAKAEELADN LACIMITYPS
THGVYETTIA EICNIIHDNG GQVYLDGANM NAQVGLTSPG FIGADVSHLN LHKTFAIPHG
GGGPGMGPIG VKSHLAPFLP DHALINVDEA TKGNGAVSSA PFGSASILPI TYLYIALLGK
KGVTDATKYA ITNANYVSKK LSEHYPILYS GKNGRVAHEC IVDLRPLKAS SGVTEVDMAK
RLMDYGFHSP TMSFPVAGTF MIEPTESESK VELDRFIEAM VCIRDEVRKV ESGEWASDNN
PLHNAPHTLA DITEPWDRPY SIQEAVFPVV AVTANKFWPT VNRIDDVFGD RNLICSCPPI
ESYID
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