Gene CPS_1270 details

Gene Information

• Locus tag: CPS_1270
• ID: 3521416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1303162
• End bp: 1303764
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637283734
• Product: hypothetical protein
• Protein accession: YP_268013
• Protein GI: 71280947
• COG category: [S] Function unknown
• COG ID: [COG3079] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR02292] yecA family protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAA TAACCTCAAA TAACGATACC GACAAAAACT TAATCGACTT TGCTACGATG 
CAAGCCATTT TGACCAGCGA AGATGTGAAG TCCCATGCCA GTGAACTTCA TGGTGTATTA 
ACAGGGTTAG TTTGTGCTGG TTTTGAATTT GAAGATCAAG GTTATGTAGC CATGCTGCAT 
GATTTATTCA ATGAGGGTGA TGGCTTTCCA ACGGCAGTAA AAAAAGCACT CAAGCAAATG 
TATAGTGAAT TGTGGAGCAG CATCTTAGAT GACAGTTATA GTTTTAACCT TTTACTTCCC 
GATGATGATG ACTCTATAGC TGAACGTGGT CATGCCTTAA GTGTATGGGT ACAAGGTTTT 
AACTTAGGCT TTGGTTTACA GCAAAAAGAT AGCCCAGTTG TTTCTGACGA AGTTAAAGAA 
GTACTGACTG ATTTTGGCGA AATTGCTAAC TTATCTGATG ACATGGAAGA AGATGAAGAT 
ACTGAGCAAG CGTATTTTGA AATTGGGGAA TATGTTCGAA TCTCTGCTTT ATTATGTTTT 
AGTGAACTAG CAACACCGCC AAATAATGAA AGCAATAACG AAGATAAAAA GATAATTCAC 
TAA 

 

Protein sequence

MTEITSNNDT DKNLIDFATM QAILTSEDVK SHASELHGVL TGLVCAGFEF EDQGYVAMLH 
DLFNEGDGFP TAVKKALKQM YSELWSSILD DSYSFNLLLP DDDDSIAERG HALSVWVQGF 
NLGFGLQQKD SPVVSDEVKE VLTDFGEIAN LSDDMEEDED TEQAYFEIGE YVRISALLCF 
SELATPPNNE SNNEDKKIIH