| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1266 |
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| Symbol | |
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| ID | 3521158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1298615 |
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| End bp | 1300003 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283730 |
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| Product | putative C4-dicarboxylate transporter family protein, DctM subunit |
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| Protein accession | YP_268009 |
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| Protein GI | 71280689 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATTA ATGAAATTCT AGTTATCAGC ATGTTTTTAA CCTTCATTGT CTTTCTATTT
ACTGGTATTC CAATCGCCTA TGTTCTAGCC GGTGTTGGTA TTCTCTTTGG TGGTATAGGC
TATCTGTCAG ATCTACATTT GGATACGTTT ACCGGCCTTG ATTTAAATGT TCTAGGCCTC
TCTGTTTCCC GGATATTTTC TTTGATGGAA AACTGGGTGC TGGTTGCCTT ACCCATGTTT
ATTTTTATGG GCTTAATGCT TGATAAATCA GGCGTAGCTG AACGCATGAT GATGGCAATG
CAAGAGCTCT TTGGTCGTGT TCGTGGTGGT TTAGGTATCA CTGTAACCTT GATAGGTATT
ATTTTAGCTG CCTCTACAGG CATTATCGGT GCATCTGTTG TATTACTTGG CTTGTTATCT
ATTCCTGCCA TGATGAAGCA AAATTATTCC AAAACCTTCG CTACAGGCAT AGTGTGTAGT
GCGGGTTGTT TAGGCATTTT AATACCACCA AGCATTATGT TAGTGATCAT GGCTGATCAA
TTAGCACTGT CTGTTGGTGA TTTATTCACT GCCGCAGTAT TCCCTGGATT AATGTTAGGT
GTGGTTTATC TCGCTTATAT TTTAGGCTTG TCATTTTTTA AACCTGAAGT CGCTCCAGCG
CCTGAAAATC GCCGCCCATT GACGGCTAAA GTCTTGGTAG AAGTCTTTAA AGCTATACTA
CCAACGCTGG TATTAATTAT TGCGGTATTA GGTTCTATTT TTGCAGGTAT TGCCACACCG
ACCGAGGCGA GTGGTGTTGG CGCACTAGGT GCAACTATCT TAGCTGCATT GAATAAGAAA
CTTAATTTTA AAGTATTTCA CGAAGTGTTG ATGGCATCTT ATAAAACGAC GGCTTATATC
TTTGCCATTT TTATAGGTGC AACAATTTTT TCCTTGGTGT TACGCGAATT AGGTGGCGAT
GAATTTATAT CAAGCATGTT AACGGGTTTA CCTTTTGGTC CCTATGGTGT GTTATTTGTT
ATTCTTGTTA TCGTATTTTT ATTAGGTTTT TTATTGGACT GGATAGAAAT CACTTTAATA
GTATTACCTT TATTGGCACC GGTAGTGAGT TCGTTAGACT TTGGCATCGG GGCTGTTAAC
GGATTAGATC AACCTGTTTT AGTTTGGTTT GTCATGCTGA TAGCCGTTAC GCTGCAAACT
TCATTTTTAA CACCACCTGT TGGTTTTGCC TTGTTCTATT TAAAAGGTGT TTGTCCTCCA
GAAATCAAAC TAACCGACAT TTATAAAGGC GTAATACCCT TTATAATATT GCAATTATTA
GGTCTTGGGG CGTTAATTAT GTATCCAGAA GTTGCCTTGT GGTTACCCTC TATGGTCTAT
GGTAAATAG
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| Protein sequence | MAINEILVIS MFLTFIVFLF TGIPIAYVLA GVGILFGGIG YLSDLHLDTF TGLDLNVLGL
SVSRIFSLME NWVLVALPMF IFMGLMLDKS GVAERMMMAM QELFGRVRGG LGITVTLIGI
ILAASTGIIG ASVVLLGLLS IPAMMKQNYS KTFATGIVCS AGCLGILIPP SIMLVIMADQ
LALSVGDLFT AAVFPGLMLG VVYLAYILGL SFFKPEVAPA PENRRPLTAK VLVEVFKAIL
PTLVLIIAVL GSIFAGIATP TEASGVGALG ATILAALNKK LNFKVFHEVL MASYKTTAYI
FAIFIGATIF SLVLRELGGD EFISSMLTGL PFGPYGVLFV ILVIVFLLGF LLDWIEITLI
VLPLLAPVVS SLDFGIGAVN GLDQPVLVWF VMLIAVTLQT SFLTPPVGFA LFYLKGVCPP
EIKLTDIYKG VIPFIILQLL GLGALIMYPE VALWLPSMVY GK
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