| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1264 |
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| Symbol | |
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| ID | 3518769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1296642 |
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| End bp | 1297706 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283728 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_268007 |
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| Protein GI | 71278630 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.656157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTCCTTTATT ATTATTAAGT ACTTTAATTG CAGGCAGTTT CTCAGGTGCG
GTTATGGCTG AAAAGAAAAT GCTTCTTAAG ACGCCTATTT ATTATAACTC GGTACTACCA
AGCTTAGGTT CAACCATTAA GTATGTATCT GACAATATTC AAACATTAAG TGGCAACACG
TTAAAAATGA AAATTTACGA GCCTAATAAA CTCGTTAACC CGAAAGAAAT ACTTGATGCA
GTATCTACAG GTAAGGTACA AGCCGGTTAT GCTACAGCAG GTAACTGGGG CGGAAAAATC
CCCGCGGCTC GTTTGTTTTC AGCGGTTCCT TTTGGTCCAG AAGCGCCTGA ATATTTAGCT
TGGTTCTATC ATGGCAACGG CAATAAATTG CATCAAGAAT TATATGATGA CAATAACCTT
AATGTAAAAG TGCAAGTGTG TGGTGTTTTA GCCCCTGAAA CATCAGGTTG GTTTAAAAAC
GAAATTAACA AACCTGAAGA CTTAGCTGGT TTAAAAATGC GTTTCTTCGG TTTAGGCGCT
CTGGTCATGG AAAAATTGGG TGTTAGTACC GTAGGTTTAC CTGGTGGTGA AATCTTCCCT
GCCATTGAAA AAGGTGTTAT CGATGCCACT GAATTTTCAA TGCCGGTAGT TGATCAACGT
ATTGGTGTAA AGAAACTGCT TAACTACAAC TACTTCCCTG GTTGGCATCA ACAAGCCACG
ATGATGGAAC TCATTATCAA TAAAGATACC TGGAAAAAAA TGAGTGAACG TCAACAGTCA
GTTATTGAGC ACTTATGTAA ATCAGCAACG TTAGAAGCTA TTGCGCTCGG TGAAGCAATT
CAAGCACCAG TCATGAAGCA AAACATTGAA GATGGCGTAA TAAACAAATA TTGGTCGCCT
GAAATGCTAT CGACGTTTAA AACTAAGTGG GATGAAGTGG TTATTGAACA ATCGGCTGCA
GATCCAGCCT TTAAGAAAAT ACATGATGAC TTAGCTAAGT TCCGTAAAAC TTACGATTTA
TGGGAATCAA ACGCTTTCTT ACCCCGCCCA AAACCTAGCC TTTAA
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| Protein sequence | MKKFPLLLLS TLIAGSFSGA VMAEKKMLLK TPIYYNSVLP SLGSTIKYVS DNIQTLSGNT
LKMKIYEPNK LVNPKEILDA VSTGKVQAGY ATAGNWGGKI PAARLFSAVP FGPEAPEYLA
WFYHGNGNKL HQELYDDNNL NVKVQVCGVL APETSGWFKN EINKPEDLAG LKMRFFGLGA
LVMEKLGVST VGLPGGEIFP AIEKGVIDAT EFSMPVVDQR IGVKKLLNYN YFPGWHQQAT
MMELIINKDT WKKMSERQQS VIEHLCKSAT LEAIALGEAI QAPVMKQNIE DGVINKYWSP
EMLSTFKTKW DEVVIEQSAA DPAFKKIHDD LAKFRKTYDL WESNAFLPRP KPSL
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