| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1258 |
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| Symbol | |
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| ID | 3522631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1289047 |
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| End bp | 1290375 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283722 |
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| Product | putative MFS transporter family protein |
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| Protein accession | YP_268001 |
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| Protein GI | 71282158 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.63699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATG TTGTTTCAGT AAAGCGCTTT AAAGCATTCC CACGATTAAT GTGGATCTTG
TTATTTGGTT CATTTATCAC CCGTGGTAGT TACTACATGG TATGGCCATT TTTAGCGGTA
ATCCTTTACG AAAAGTTTGC ATTATCTGCC ACACATGTAG GGCTCATTCT TTCAAGCGCT
GCCGTTATTT CAGTGCTAGT GAGTTTCGTT GGTAGCGCGT TATCTGATCG AATTGGCCGT
CATCAGTTAA TGTATGCCAG TGGTATTTTA TATATCATTT CTTTTTCGAT ATTAGCTGAG
GTGGATTCCA TTGCCGGTTA TTCGCTGGTG ATCACCTTGT GTTCAATTGC TACTGCGCTC
TGGCGGCCAC TCACCTCAGC ATTAATCGGC GATATCATCA AAGATAAAGG CACTCGCGAA
CTAGCCATGC AGTCATTGTA TTTTGTCGTT AATGTCGGTT GTGCTGTCGG CCCAATGTTA
GGGCTGTGGT TAGGTTTAAC AGGAGAGCAA TCAAGTTTTT ATATTACGGC GGCAGCATTT
GCCTTTTTAT TGGTGCTTTT ATGGTGGGGC TTTCATCAAC ACAGTAAGTT AGAGAACGAA
AAATCAGTGC AAGCTAATCA AAGGGCTGCC GATTCGCTGG ATAATAAAAA AAATAGCATC
TCTACTGAGA CTCACAATCA AAATAAAACG CAGACTAACA TCACAACGAA AAATGGTGCA
AGTAATCAAA TACTAAAGGT ATTAATGGCT GATAAGTTAT TACAATGTCT TATTTTTGCC
AATATCTTAT GCATGTTTAT TTATGCACAA ATGGATAGCT CGCTTATACA ATATTTAACG
CGAGCTAAAG TCCCTGATTT ATTACAGCTT ATTTCAGCGA TGATTTTTAC CAATGCGTTA
GTGATCATTT CAACGCAATT TCTATTACTG AAGTTAATGG CAAGTTTATC TTTAATTAGC
CGAATACAGG TCGGTCTAGT GTTATTGATG TGCTCACAAA TTTGGCTAGC GGTAAATCCA
TTAACGCTTT TTTGGGGGTG GATTGGTGCG ATTGTAGTGA TGAGCTTAGC GGAAACTATT
TTATTCCCAA CCATGAACGT GCATATTGAT CGTTTGGCCC CGGAGCATTT ACGTGGTGCT
TATTTTGGTG CCGCCTCATT TTATGAATTT GGCTATGCTA TAGCGCCATT AGGTGGCGGT
ATTATTCTCG ACCAACTGGG CGGTTCTTGG TTATTCTTTA TTGCTGCAGC GTTAACACTG
ATTGTTATTT ATCTTTACAG TATGTTGGAT AATTTACCTC GACCTGACTT TGTAAAACTT
GAAAATTAG
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| Protein sequence | MSNVVSVKRF KAFPRLMWIL LFGSFITRGS YYMVWPFLAV ILYEKFALSA THVGLILSSA
AVISVLVSFV GSALSDRIGR HQLMYASGIL YIISFSILAE VDSIAGYSLV ITLCSIATAL
WRPLTSALIG DIIKDKGTRE LAMQSLYFVV NVGCAVGPML GLWLGLTGEQ SSFYITAAAF
AFLLVLLWWG FHQHSKLENE KSVQANQRAA DSLDNKKNSI STETHNQNKT QTNITTKNGA
SNQILKVLMA DKLLQCLIFA NILCMFIYAQ MDSSLIQYLT RAKVPDLLQL ISAMIFTNAL
VIISTQFLLL KLMASLSLIS RIQVGLVLLM CSQIWLAVNP LTLFWGWIGA IVVMSLAETI
LFPTMNVHID RLAPEHLRGA YFGAASFYEF GYAIAPLGGG IILDQLGGSW LFFIAAALTL
IVIYLYSMLD NLPRPDFVKL EN
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