| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1254 |
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| Symbol | |
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| ID | 3520522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1284938 |
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| End bp | 1285672 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283718 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_267997 |
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| Protein GI | 71280059 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.029573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTAACC CAAGAATTTT TCAACAAAGT CAATTTGCTC TTAACGAAAC AGTGCCATTA
TCTGATGACG CCTTTGGTCA TGTAGTGCGC GTTTTACGTC TAAAAGAAGG TGACACTATT
ACATTATTCA ATGGTGAAGA AGCTTTTCAA TATACAGCAA CACTCTGTAA TGTAAGTAAA
AAATCAGCTG ATGTAAAAGT TACTTCCCAA GAGGAAAACA ACAGTGAATC ACCGCTTAAT
ATCCATTTAG GGCAAGGTAT TTCTCGTGGC GATAGAATGG ACTTTACGTT ACAAAAATCG
GTAGAGCTTG GCGTAAATAC CATTACCCCT TTATTCACCG AGCGCTGCGG AGTAAAACTT
AATGCCGAAC GTCTTGAGAA AAAACGTCAA CAGTGGCAAA AAATTGTCAT TAGCGCTTGT
GAGCAAAGTG GTCGTGCAAG CGTGCCCATT GTTGCAGAGC CGATGTTATT AGCTGATTGG
TTAAAACAAG AAACCAGTGC TTTGAAAATT AATTTACACC CAAAAGCACA GCATTCCATC
ATGAGTTTGC CTATGGAAAA TACCCGTGTT CGATTACTCA TTGGTCCTGA AGGCGGGTTA
AGTGATGAAG AAATCACGCA AGCCAATGAC AGTGATTTTC ACGATGTACT GCTTGGCCCC
AGAGTATTAC GCACTGAAAC GGCGGCATTA ACGGCAATTA CTGCATTACA ATGTCGCTTT
GGTGATTTAC ACTAA
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| Protein sequence | MRNPRIFQQS QFALNETVPL SDDAFGHVVR VLRLKEGDTI TLFNGEEAFQ YTATLCNVSK
KSADVKVTSQ EENNSESPLN IHLGQGISRG DRMDFTLQKS VELGVNTITP LFTERCGVKL
NAERLEKKRQ QWQKIVISAC EQSGRASVPI VAEPMLLADW LKQETSALKI NLHPKAQHSI
MSLPMENTRV RLLIGPEGGL SDEEITQAND SDFHDVLLGP RVLRTETAAL TAITALQCRF
GDLH
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