| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1217 |
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| Symbol | pilE |
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| ID | 3520649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1251986 |
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| End bp | 1252411 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283681 |
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| Product | type IV pilus biogenesis protein PilE |
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| Protein accession | YP_267960 |
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| Protein GI | 71280185 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTATAA GTAAGACTAT AGTACAAAAG CAAAGCGGCT TTACCTTAAT AGAATTAATG
ATAGTTGTGG CTATTATTGG TATTTTAGCC GCAGTTGTTT ATCCATCTTA TACTGATTTT
ATTGTGCGCT CAAATAGGGC TGAAGCACAG CGAGAGTTAG TACGTATTGC AAACTTGCAA
GAGCAACTCT TTGTCGATAG CCGAAGTTAT AGCAATGATA TGAACCTTTT GGGGCTTGGG
GCTGATCCTT TTGTGACTGA AAATGGTAAT TATAGTATTG ATGCAACTAT TGCCAATAAC
GGTACCACCT TTGTTTTAAC CGCCACTGCA CAAGGTTCTC AGTCAAGAGA TACCGACTGC
TCTAATTTAA CGATAAACGA AGTCGGACAG CAAAGTGCGG CTAATAACTT TTGCTGGGAG
AAGTAA
|
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| Protein sequence | MLISKTIVQK QSGFTLIELM IVVAIIGILA AVVYPSYTDF IVRSNRAEAQ RELVRIANLQ
EQLFVDSRSY SNDMNLLGLG ADPFVTENGN YSIDATIANN GTTFVLTATA QGSQSRDTDC
SNLTINEVGQ QSAANNFCWE K
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