| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1210 |
|---|
| Symbol | |
|---|
| ID | 3521585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1243168 |
|---|
| End bp | 1244127 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637283674 |
|---|
| Product | putative phosphate ABC transporter, periplasmic phosphate-binding protein |
|---|
| Protein accession | YP_267953 |
|---|
| Protein GI | 71281115 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0226] ABC-type phosphate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02136] phosphate binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTA AAAAAGTTAT AAGTATTATT AGTTTATCAA GTCTTGTTAG TTTATCTGCT
TTTGCCCTTG ATGAAAAATT ACCAGAATAT AAAAAAGTTA GTGGTATTTC TGGCAATGTA
TCTTCAGTTG GCTCTGATAC CTTAGCGAAC ATGATGACTT TTTGGGCAGA AGATTTTAAG
CGTACTTACC CAAATGTAAA TGTACAAATT CAGGCTGCTG GTTCGTCAAC AGCGCCACCT
GCTTTAACTG AAGCTACTTC AAACCTTGGG CCTATGAGTC GTAAAATGAA AATGCGTGAG
ATAGAAGCTT TTCAAAAGCG CTATGGTTAT AAACCTACTC GAGTTCGAGT TGCTATAGAT
GCTTTGGCTG TTTTTGTTCA TAAAGATAAT CCATTAGAAG GGTTAACGAT TGCGCAAGTT
GATGCTGTAT TCTCTAATAA CCGTAAGTGT GGTGCTGATA AAGATATTGA CCGTTGGGGA
GATCTTGGTT TATCGGGCGC ATGGACAGGT AAAGATGTGC AATTATATGG AAGAAACTCT
GTTTCTGGCA CCTACGGTTA CTTTAAGAAG AAAGCGCTAT GTAAAGGTGA CTTTAAAAAC
AGTGTGAATG AGCAGCCTGG ATCAGCATCA GTTGTACAGT CGGTATCCGC CTCACTTAAC
GGAATTGGCT ATTCAGGTAT AGGTTACCGT ACTTCTGGAG TGCGAGCTTT ACCATTAGCT
AAAAAAGGCC AAGTCTTTAT TGAAGCTAAT ATGGAAAATG CAATTTCAGG TAAATACCCG
TTATCACGCT ATTTATACGT CTATGTCAAC AAGCACCCGA ATAAAGCGCT TCCACCAATG
GAAGCTGAAT TTTTAAAAAT GATTCTATCT AAAACAGGTC AAAAAATTGT TGAAAAAGAT
GGTTATATAC CTTTACCAAG TAAAGTTGTT GCCAAAGAAT ATAAAAAATT AGGTCTATAA
|
|---|
| Protein sequence | MSFKKVISII SLSSLVSLSA FALDEKLPEY KKVSGISGNV SSVGSDTLAN MMTFWAEDFK
RTYPNVNVQI QAAGSSTAPP ALTEATSNLG PMSRKMKMRE IEAFQKRYGY KPTRVRVAID
ALAVFVHKDN PLEGLTIAQV DAVFSNNRKC GADKDIDRWG DLGLSGAWTG KDVQLYGRNS
VSGTYGYFKK KALCKGDFKN SVNEQPGSAS VVQSVSASLN GIGYSGIGYR TSGVRALPLA
KKGQVFIEAN MENAISGKYP LSRYLYVYVN KHPNKALPPM EAEFLKMILS KTGQKIVEKD
GYIPLPSKVV AKEYKKLGL
|
|---|
| |