| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1195 |
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| Symbol | |
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| ID | 3520200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1223606 |
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| End bp | 1226242 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283659 |
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| Product | intimin/invasin family protein |
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| Protein accession | YP_267938 |
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| Protein GI | 71279739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTAT TTCGACGTTT AAGTTTTACC ATGTTATTGA TGTCAATGAT GACACTCGTA
GCGTGCGGTG GTGGAGATGG TGATCTAACT GGTGGAGGTG ATGGCGGAGG CGGCACGTCT
GATGCTGTAA CGTTAACTGT TGTAAAATCT GATGGTGATT TGTCAGCAGC TAATGATGTG
ACCGTTTCAG CAACAGTTGT TGAAAATGGT AGTGCCGTAG TTAATAAAAC CGTTACTTTT
ACGTTAGCCG TTGAAGGCTC GGCTACATTC GACCCTGTTT CAAGTACAGC AACAACGGAT
GCAAATGGTA TTGCGACCAT TATTGTAAAA GTAACCGATG TAAAAGGCTC TGTTAATGTT
ATCGCCAGTT ATGAAAGTGC TACAGATAAT ATTAGTTTTA ATAGTGCCGG GGATGGCGAT
GGTACTGACT TAGCTACTAT ACTTTCTATT TCAATTTCGG ATAGCAATGT AACCGAACAA
AGCCCAGCGA CAATTTCCGT TACCGTATTA GCCGATGGAG AAGTTGTTAT TGGTGAAGTT
GTTACTTTTA CAACCACACT TGGCAGCTTT TCACCAGAAA CGGGGACTGC ATTAACAGGA
GATGGTGGTA TTGCTACAAT CGTGTTGAAT GGTGGCGATG TATCTGGCGC AGGAACAGTA
ACGGCGAATG TCTCTTCCAG TGAGAGCGTT TCAGTTGGTT TTACTACTCA AGCAGCAGGC
TCTATCGTTT TGAAACTAGG TGCAGGTGAA CCTTTTGTTG AAGGAGAGAT TCTCGTTAGT
TTATCACCTC TTTCAGCTGG CGGTACAAGT GTTATTTCTG TAAGTTTGGT TGATGAACAA
AACCAATTGT ATGCGGAATC GGCTGAATTT ACATTTACCT CGTTATGTTC AGCACAAACA
ACTCCTACCG CTTCTTTAGA TAGCCCTATA GTTACTTCAA ATGGTAAAGC TGAAAGTGTC
TACTTTGCTA AGGGCTGTGT TGGCGATGAC CCAATAACGG TAAACGTAGT TGTTAATGGT
CAAAACCTCT CAGCTACAGG CTCCATTGAA GTATTATCTG CAGCCCTTGG TAGTATTCAA
TTTGTTTCGG CTACCCCTGA ACATATAGCA ATTCAAGGGG CTGGAAGTGA TGAGCGCCCG
GAAAGTGCAA CGGTAATTTT TAAAGTACTA GATACAAATA GCAATCCGCT CAGCGGCAAG
GATGTAACTT TTTCATTAAG CAGTACTATT GGTGGAATTA TATTAAACCC AATTAATGCG
ACAACTAATA ATGAAGGTTT AGTACAGACG GTAGTCAATT CGGGAACTGT AGCTAGAACT
GTAAGGGTGC TTGCTAGTGT TGATGATAGT GACCCTGTTA TTCAAACTCA ATCAGGTGAA
TTAAAAATAT CTACGGGTAT CCCTGATCAA GACAGTATGA GCATTGCTGC AAGTAATTTA
GCGCCAAGAG CATGGAACCA TGATGGTGTT GAAGTAACAC TTACCGCAAG ATTAGGAGAT
GCTTTTAACA ACCCACCCCC AGCAACGGCA GTATACTTCA CCACTGAAGG TGGCTCCATT
GAGAATTTAG ATGCTAGTTG TACAACTGGT GATGATGGTT CATGTTCTGT TATTTGGCGT
AGTCAATACC CTCGTCCTGT AGGTCACATT TTAGGAGATG TTAATAACCC TAATCAAGTT
CCTAAGCTCC CTTTAGCTAA TAATAAAGGT GTTATGGGAC AAAATTATGG AGGCCGAGTC
ACTATTTTAG CAACGACAAT TGGTGAGGAG TCTTTTCCTG ACTTAAATGG TAATGGTCGA
TTTGATGTGT GTGAATTGCC TGCTTTCCTT GGTACTACAA TTTATAATAA CACTTATAAT
AAAACTGGTA ACGGTAAACC TTGTCTAGGT GATGGTAGTT TTGATGACTC AGCCGATGAT
ATTCCTTTTT CTTACCTAGG TAAAGACGTC AGTGGTCGGT TTTATGATAT TGGTGAAGCT
TTTGCTGATT ATAATGAGGA TGGGGTATTC AACCAACTAT CAGGCGCTGA AGCAGGTGGT
GAACTAGAAG AACTAGTTGA TTTTAATCAA AATGGAGTTT ATGACGGTAA AGATGGTAAA
TATAATGGTA TTTTATGTGC CATTCCTGCA CACGATGGCT GTGCTGCAGA AACATCGTTA
GATATCAAAG CACAAATGGT TATTGTAATG TCTGGGGATA CACCATATAT ATGTGTTAAT
TCTTCTTTCG ACAGTGGTGT TATTGCCGCA GGAGATGAAA GTAAACTTAC AGCATATTCA
GCTAGCTCTA GAGAATTTTG TGAAAATAAG ACTGATGATA CCTTTGCAGC TAAGCAGCAC
CGTGACAATG ATGATAAATT GTTTTTAGCA CCTAAGGCGT CTGGAAGTGT TGTTATTACT
ATGGCTGACT TGCATAACCA GCCTATGCCA GCAGGTACTG AAGTGTCTTT TAAGTCGTCT
GTTGGTTCTG TAACATCGGG GACATCAGAC TGGGAAGGTA ATAGAAATGG CGGTAGCCAG
TTTTTTGCGA CAATTAAAGC TGGCGAAGAT ATAGAGTCGG GGACGTTAGA TGTCATATTG
ACATTTGAGG GAGGTGATAA AGTTACTGTC CGTGTTGCAG ATATTTATAT TCAATAA
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| Protein sequence | MQLFRRLSFT MLLMSMMTLV ACGGGDGDLT GGGDGGGGTS DAVTLTVVKS DGDLSAANDV
TVSATVVENG SAVVNKTVTF TLAVEGSATF DPVSSTATTD ANGIATIIVK VTDVKGSVNV
IASYESATDN ISFNSAGDGD GTDLATILSI SISDSNVTEQ SPATISVTVL ADGEVVIGEV
VTFTTTLGSF SPETGTALTG DGGIATIVLN GGDVSGAGTV TANVSSSESV SVGFTTQAAG
SIVLKLGAGE PFVEGEILVS LSPLSAGGTS VISVSLVDEQ NQLYAESAEF TFTSLCSAQT
TPTASLDSPI VTSNGKAESV YFAKGCVGDD PITVNVVVNG QNLSATGSIE VLSAALGSIQ
FVSATPEHIA IQGAGSDERP ESATVIFKVL DTNSNPLSGK DVTFSLSSTI GGIILNPINA
TTNNEGLVQT VVNSGTVART VRVLASVDDS DPVIQTQSGE LKISTGIPDQ DSMSIAASNL
APRAWNHDGV EVTLTARLGD AFNNPPPATA VYFTTEGGSI ENLDASCTTG DDGSCSVIWR
SQYPRPVGHI LGDVNNPNQV PKLPLANNKG VMGQNYGGRV TILATTIGEE SFPDLNGNGR
FDVCELPAFL GTTIYNNTYN KTGNGKPCLG DGSFDDSADD IPFSYLGKDV SGRFYDIGEA
FADYNEDGVF NQLSGAEAGG ELEELVDFNQ NGVYDGKDGK YNGILCAIPA HDGCAAETSL
DIKAQMVIVM SGDTPYICVN SSFDSGVIAA GDESKLTAYS ASSREFCENK TDDTFAAKQH
RDNDDKLFLA PKASGSVVIT MADLHNQPMP AGTEVSFKSS VGSVTSGTSD WEGNRNGGSQ
FFATIKAGED IESGTLDVIL TFEGGDKVTV RVADIYIQ
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