Gene CPS_1183 details

Gene Information

• Locus tag: CPS_1183
• Symbol: lspA
• ID: 3522632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1211442
• End bp: 1211984
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637283647
• Product: signal peptidase II
• Protein accession: YP_267926
• Protein GI: 71282159
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATTAC CACCATTGAA AAAATTATTT AGTGATACCG GATTACGTTG GTTATGGCTA 
ACCTTACTAT GCTTAATCAT TGATCAGGTG AGTAAACATT GGGTTGCAGG TACATTTGAT 
TATCGTGAAA CTTTGTCGGT TTTGCCATTT TTCAACCTCA CGTACGTTCA TAACCCTGGT 
GCAGCCTTTA GCTTTTTAGC TGACCAAGGT GGTTGGCAAC GCTGGTTTTT TACTGGGATT 
GCCAGTATAG CTAGTATTGT ATTTCTCGTT TGGATGGCAA AAACACCTAA ACAGCAACGT 
TTATTAAGTA TTGCTTTTGC TTTGATTTTA AGCGGCGCCG TAGGTAACTT GATCGATAGA 
GCTTTATTTG GTTACGTTAT CGACTTTCTT GATTTTCATT GGGCGGGCTA CCACTTTGCC 
GCTTTTAATA TTGCCGACTC AGTTATTTTC ATTGGTGCAG CACTAATGAT TTTTGAATCC 
TTCTCTAATC AGGGAAATAA TAAAGAAGCT AATAAAGAAC CTAGTCAAGA AAACAAGAAA 
TAA 

 

Protein sequence

MRLPPLKKLF SDTGLRWLWL TLLCLIIDQV SKHWVAGTFD YRETLSVLPF FNLTYVHNPG 
AAFSFLADQG GWQRWFFTGI ASIASIVFLV WMAKTPKQQR LLSIAFALIL SGAVGNLIDR 
ALFGYVIDFL DFHWAGYHFA AFNIADSVIF IGAALMIFES FSNQGNNKEA NKEPSQENKK