Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1182 |
Symbol | ileS |
ID | 3518669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1208450 |
End bp | 1211311 |
Gene Length | 2862 bp |
Protein Length | 953 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283646 |
Product | isoleucyl-tRNA synthetase |
Protein accession | YP_267925 |
Protein GI | 71277791 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0060] Isoleucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGATT ACAAACAGAC CCTGAATTTA CCAGCCACCT CCTTTGCTAT GAAAGGTAAT ATGGCTAACC GTGAACCTAA TATGCTCAAA TATTGGGCAG CTAAAGATCT TTATGGCAAG ATTCGTGAAG CCAAGAAAGG TAAAAAGTCA TTTATTCTTC ATGATGGCCC TCCTTATGCC AATGGTAATA TTCACTTAGG CCATGCCGTT AATAAAATCT TAAAAGATAT TATTGTTAAA TCAAAAAACT TATCTGATTT CAATTCTCCT TTCGTACCCG GTTGGGATTG TCACGGTTTA CCGATTGAAT TAATGGTTGA GAAAAAAGTA GGCAAACCTG GTCATAAGAT TAGCGCTAGC GACTTTCGTC AAAAATGTCG TGAATACGCC GCTAAGCAAG TTAATGGTCA ACGTGAAGAT TTCAAACGTT TAGGTATTTT CGCAGATTGG GAAAAGCCAT ACTTAACCAT GGATTTTGGT ACAGAAGCCA ATATTATCCG TTCATTAGGT AAAATTGCTG AAAATGGTCA CTTACATCAA GGTTTTAAAC CTGTGCATTG GTGTACTGAT TGTGGTTCGT CTTTAGCTGA AGCTGAAGTT GAATATAAAG ACAAGCAATC TCCAGCTATT GATGTGAAAT TTACTATTAG CGACGAATCA GTAGCAGATA AATTCTCTCA CCCAGAAGGC CATAAAGGCG AAGGTGAAAT CGGCGCTGTG ATTTGGACAA CAACACCTTG GACACTTCCA GCTAACCGTG CAATAGCAGT GAATGCTGAG GTTGAATATA CTTTAGTTCA ATGTGAACAG GCAGGTGAAA AGCAACGTTT AATCATTGCT TCTGATTTAG TTACTACCTG TATGGACCGC TTTGGCTTTG ATAAATACCA TGCATTAGGT TTCTGTAAAG GTAGCGAGCT AGAGCTAGTA CAATGTCAAC ATCCGTTCTA TGACTTCACG GTTCCTGTTG TTTTAGGTGA ACATGTAACG ACAGACTCAG GTACCGGTTG TGTACATACT GCACCAGGTC ACGGTGTAGA AGATTTTGTT GTTGGTAAAC TATATGACTT AGAAGTGGCT AACCCTGTTG GCGCTAACGG CGTATACCTT GAAGATACGC CATTACTTGC TGGACAACAT GTATTTAAAG CCAATGCTAG TGTTGTTGAA TTGTTAAAAG AAAAGGGTGC TTTAGTACAT CATCATGCGT TAGATCATTC TTACCCGCAT TGTTGGAGAC ATAAAACACC ACTAATTTTC CGTGCTACGC CGCAGTGGTT TATCAGCATG GACAAAAAAG GTTTACGTCA AGATTCATTA AACGAAATCG AAAAAACACA GTGGATCCCT GATTGGGGTC AACGCCGTAT AGAATCTATG GTTGAAGGTC GTCCAGATTG GTGTATTTCA CGTCAACGCA CGTGGGGCGT GCCTATGGCA TTGTTTATTC ATCAAGATTC GGGTGCATTG CATCCGCGTA GCATTGAGCT TATTGAAGAA GTTGCTCTTC TTGTTGAAAA ATCAGGTATT CAAGCTTGGT TCGATCTAGA GGCGATCGAG TTAATTGGCG ATGATGCGAA AGAATACATT AAAGTACCTG ATACGTTAGA TGTATGGTTT GATTCAGGTA CTACCCATGA ATCAGTTATC AAAGCGCGTG ACGAATTTGA CGGTATTGCA GATTTATATC TTGAAGGCTC TGATCAACAT CGTGGTTGGT TTATGTCATC AATGATTTCA TCAGTAGCGA TGAATGGTGC AGCGCCATAT AAGCAAGTAC TTACTCACGG TTTTGTGGTT GACGCTAAAG GTCACAAAAT GTCTAAGTCG TTAGGTAATG TTATTACGCC AAAAGAAATT ACTAACAACT TAGGCGCTGA TATTTTACGT CTGTGGACTG CTTCAGTAAA TTACACGCAA GAAATAACTG CGGGTGATGA AATCTTCAAA CGTCAAGCCG ATGCTTACCG TCGTATTCGT AATACGTCAC GTTTCTTATT ATCTAACTTA ACTGGTTTTG AACCAGCTAA CCACATGGTT GCTGTTGAAG ATATGGTTGC GCTTGATCGC TGGGTTATCG ATAAAGCAGC TCGTTTACAA GAAGAAATTA TCAACGCGTA TGATGAATAT GAATTTCATG TAGTTGTACA TAAGTTAATG AACTTTTGTA CGAATGAATT GGGTGGCTTT TACTTAGATA TTATCAAAGA CAGACAATAC ACAGCTAAGA GCGATTCAAA TGCACGTCGT TCATGTCAAA CAGCTATGTA CTTAATTGCT GAAGCCATGA CTGCATGGAT GGCACCAATC TTGTCATTTA CTGCACAAGA AATCTGGGAA GCCTTACCGT TACCTGTTAG TGGTGAACGC GATGAGTTTG TTTTCACTGG TGTTTGGTTT GATGGCCTTA TGAAGCAGGA AAGTAAGCAA GACGAAAGCA CTGAATCTTC AGATGAGCTT GGTAATGAGT ACTGGACTGA ATTGCTGACT GTTCGTGGTG AAGTTAACCG CGCGTTAGAG CAAGCAAGAA AAGATAAGTC TGTTGGTAAA GCACTAGAAG CGCAAGTTAC TTTGTTCGCA ACTGCTGACC TAGCCGCTAA ATTAGCTAAA TTGGGTGATG AGCTTCGTTT TGTTTTAATC ACCTCTAAAG CGACTATTGA AACAGTAACG TCGGCACCAG AAAATGCCCT TGAAACTGAG GTTGAAGGTT TATGGTTAAC TGTGGCACCT GCTGAAGGTA TTAAGTGTGA GCGTTGTTGG CATGTCACTA CTGACATTGG CGAAAGCGAA AAACACCCAA CGTTATGTGG TCGTTGCATC ACTAATATTG ATGGTGAAGG TGAAACAAGA CAGTTTGCTT AA
|
Protein sequence | MSDYKQTLNL PATSFAMKGN MANREPNMLK YWAAKDLYGK IREAKKGKKS FILHDGPPYA NGNIHLGHAV NKILKDIIVK SKNLSDFNSP FVPGWDCHGL PIELMVEKKV GKPGHKISAS DFRQKCREYA AKQVNGQRED FKRLGIFADW EKPYLTMDFG TEANIIRSLG KIAENGHLHQ GFKPVHWCTD CGSSLAEAEV EYKDKQSPAI DVKFTISDES VADKFSHPEG HKGEGEIGAV IWTTTPWTLP ANRAIAVNAE VEYTLVQCEQ AGEKQRLIIA SDLVTTCMDR FGFDKYHALG FCKGSELELV QCQHPFYDFT VPVVLGEHVT TDSGTGCVHT APGHGVEDFV VGKLYDLEVA NPVGANGVYL EDTPLLAGQH VFKANASVVE LLKEKGALVH HHALDHSYPH CWRHKTPLIF RATPQWFISM DKKGLRQDSL NEIEKTQWIP DWGQRRIESM VEGRPDWCIS RQRTWGVPMA LFIHQDSGAL HPRSIELIEE VALLVEKSGI QAWFDLEAIE LIGDDAKEYI KVPDTLDVWF DSGTTHESVI KARDEFDGIA DLYLEGSDQH RGWFMSSMIS SVAMNGAAPY KQVLTHGFVV DAKGHKMSKS LGNVITPKEI TNNLGADILR LWTASVNYTQ EITAGDEIFK RQADAYRRIR NTSRFLLSNL TGFEPANHMV AVEDMVALDR WVIDKAARLQ EEIINAYDEY EFHVVVHKLM NFCTNELGGF YLDIIKDRQY TAKSDSNARR SCQTAMYLIA EAMTAWMAPI LSFTAQEIWE ALPLPVSGER DEFVFTGVWF DGLMKQESKQ DESTESSDEL GNEYWTELLT VRGEVNRALE QARKDKSVGK ALEAQVTLFA TADLAAKLAK LGDELRFVLI TSKATIETVT SAPENALETE VEGLWLTVAP AEGIKCERCW HVTTDIGESE KHPTLCGRCI TNIDGEGETR QFA
|
| |