Gene CPS_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1182 
SymbolileS 
ID3518669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1208450 
End bp1211311 
Gene Length2862 bp 
Protein Length953 aa 
Translation table11 
GC content40% 
IMG OID637283646 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_267925 
Protein GI71277791 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT ACAAACAGAC CCTGAATTTA CCAGCCACCT CCTTTGCTAT GAAAGGTAAT 
ATGGCTAACC GTGAACCTAA TATGCTCAAA TATTGGGCAG CTAAAGATCT TTATGGCAAG
ATTCGTGAAG CCAAGAAAGG TAAAAAGTCA TTTATTCTTC ATGATGGCCC TCCTTATGCC
AATGGTAATA TTCACTTAGG CCATGCCGTT AATAAAATCT TAAAAGATAT TATTGTTAAA
TCAAAAAACT TATCTGATTT CAATTCTCCT TTCGTACCCG GTTGGGATTG TCACGGTTTA
CCGATTGAAT TAATGGTTGA GAAAAAAGTA GGCAAACCTG GTCATAAGAT TAGCGCTAGC
GACTTTCGTC AAAAATGTCG TGAATACGCC GCTAAGCAAG TTAATGGTCA ACGTGAAGAT
TTCAAACGTT TAGGTATTTT CGCAGATTGG GAAAAGCCAT ACTTAACCAT GGATTTTGGT
ACAGAAGCCA ATATTATCCG TTCATTAGGT AAAATTGCTG AAAATGGTCA CTTACATCAA
GGTTTTAAAC CTGTGCATTG GTGTACTGAT TGTGGTTCGT CTTTAGCTGA AGCTGAAGTT
GAATATAAAG ACAAGCAATC TCCAGCTATT GATGTGAAAT TTACTATTAG CGACGAATCA
GTAGCAGATA AATTCTCTCA CCCAGAAGGC CATAAAGGCG AAGGTGAAAT CGGCGCTGTG
ATTTGGACAA CAACACCTTG GACACTTCCA GCTAACCGTG CAATAGCAGT GAATGCTGAG
GTTGAATATA CTTTAGTTCA ATGTGAACAG GCAGGTGAAA AGCAACGTTT AATCATTGCT
TCTGATTTAG TTACTACCTG TATGGACCGC TTTGGCTTTG ATAAATACCA TGCATTAGGT
TTCTGTAAAG GTAGCGAGCT AGAGCTAGTA CAATGTCAAC ATCCGTTCTA TGACTTCACG
GTTCCTGTTG TTTTAGGTGA ACATGTAACG ACAGACTCAG GTACCGGTTG TGTACATACT
GCACCAGGTC ACGGTGTAGA AGATTTTGTT GTTGGTAAAC TATATGACTT AGAAGTGGCT
AACCCTGTTG GCGCTAACGG CGTATACCTT GAAGATACGC CATTACTTGC TGGACAACAT
GTATTTAAAG CCAATGCTAG TGTTGTTGAA TTGTTAAAAG AAAAGGGTGC TTTAGTACAT
CATCATGCGT TAGATCATTC TTACCCGCAT TGTTGGAGAC ATAAAACACC ACTAATTTTC
CGTGCTACGC CGCAGTGGTT TATCAGCATG GACAAAAAAG GTTTACGTCA AGATTCATTA
AACGAAATCG AAAAAACACA GTGGATCCCT GATTGGGGTC AACGCCGTAT AGAATCTATG
GTTGAAGGTC GTCCAGATTG GTGTATTTCA CGTCAACGCA CGTGGGGCGT GCCTATGGCA
TTGTTTATTC ATCAAGATTC GGGTGCATTG CATCCGCGTA GCATTGAGCT TATTGAAGAA
GTTGCTCTTC TTGTTGAAAA ATCAGGTATT CAAGCTTGGT TCGATCTAGA GGCGATCGAG
TTAATTGGCG ATGATGCGAA AGAATACATT AAAGTACCTG ATACGTTAGA TGTATGGTTT
GATTCAGGTA CTACCCATGA ATCAGTTATC AAAGCGCGTG ACGAATTTGA CGGTATTGCA
GATTTATATC TTGAAGGCTC TGATCAACAT CGTGGTTGGT TTATGTCATC AATGATTTCA
TCAGTAGCGA TGAATGGTGC AGCGCCATAT AAGCAAGTAC TTACTCACGG TTTTGTGGTT
GACGCTAAAG GTCACAAAAT GTCTAAGTCG TTAGGTAATG TTATTACGCC AAAAGAAATT
ACTAACAACT TAGGCGCTGA TATTTTACGT CTGTGGACTG CTTCAGTAAA TTACACGCAA
GAAATAACTG CGGGTGATGA AATCTTCAAA CGTCAAGCCG ATGCTTACCG TCGTATTCGT
AATACGTCAC GTTTCTTATT ATCTAACTTA ACTGGTTTTG AACCAGCTAA CCACATGGTT
GCTGTTGAAG ATATGGTTGC GCTTGATCGC TGGGTTATCG ATAAAGCAGC TCGTTTACAA
GAAGAAATTA TCAACGCGTA TGATGAATAT GAATTTCATG TAGTTGTACA TAAGTTAATG
AACTTTTGTA CGAATGAATT GGGTGGCTTT TACTTAGATA TTATCAAAGA CAGACAATAC
ACAGCTAAGA GCGATTCAAA TGCACGTCGT TCATGTCAAA CAGCTATGTA CTTAATTGCT
GAAGCCATGA CTGCATGGAT GGCACCAATC TTGTCATTTA CTGCACAAGA AATCTGGGAA
GCCTTACCGT TACCTGTTAG TGGTGAACGC GATGAGTTTG TTTTCACTGG TGTTTGGTTT
GATGGCCTTA TGAAGCAGGA AAGTAAGCAA GACGAAAGCA CTGAATCTTC AGATGAGCTT
GGTAATGAGT ACTGGACTGA ATTGCTGACT GTTCGTGGTG AAGTTAACCG CGCGTTAGAG
CAAGCAAGAA AAGATAAGTC TGTTGGTAAA GCACTAGAAG CGCAAGTTAC TTTGTTCGCA
ACTGCTGACC TAGCCGCTAA ATTAGCTAAA TTGGGTGATG AGCTTCGTTT TGTTTTAATC
ACCTCTAAAG CGACTATTGA AACAGTAACG TCGGCACCAG AAAATGCCCT TGAAACTGAG
GTTGAAGGTT TATGGTTAAC TGTGGCACCT GCTGAAGGTA TTAAGTGTGA GCGTTGTTGG
CATGTCACTA CTGACATTGG CGAAAGCGAA AAACACCCAA CGTTATGTGG TCGTTGCATC
ACTAATATTG ATGGTGAAGG TGAAACAAGA CAGTTTGCTT AA
 
Protein sequence
MSDYKQTLNL PATSFAMKGN MANREPNMLK YWAAKDLYGK IREAKKGKKS FILHDGPPYA 
NGNIHLGHAV NKILKDIIVK SKNLSDFNSP FVPGWDCHGL PIELMVEKKV GKPGHKISAS
DFRQKCREYA AKQVNGQRED FKRLGIFADW EKPYLTMDFG TEANIIRSLG KIAENGHLHQ
GFKPVHWCTD CGSSLAEAEV EYKDKQSPAI DVKFTISDES VADKFSHPEG HKGEGEIGAV
IWTTTPWTLP ANRAIAVNAE VEYTLVQCEQ AGEKQRLIIA SDLVTTCMDR FGFDKYHALG
FCKGSELELV QCQHPFYDFT VPVVLGEHVT TDSGTGCVHT APGHGVEDFV VGKLYDLEVA
NPVGANGVYL EDTPLLAGQH VFKANASVVE LLKEKGALVH HHALDHSYPH CWRHKTPLIF
RATPQWFISM DKKGLRQDSL NEIEKTQWIP DWGQRRIESM VEGRPDWCIS RQRTWGVPMA
LFIHQDSGAL HPRSIELIEE VALLVEKSGI QAWFDLEAIE LIGDDAKEYI KVPDTLDVWF
DSGTTHESVI KARDEFDGIA DLYLEGSDQH RGWFMSSMIS SVAMNGAAPY KQVLTHGFVV
DAKGHKMSKS LGNVITPKEI TNNLGADILR LWTASVNYTQ EITAGDEIFK RQADAYRRIR
NTSRFLLSNL TGFEPANHMV AVEDMVALDR WVIDKAARLQ EEIINAYDEY EFHVVVHKLM
NFCTNELGGF YLDIIKDRQY TAKSDSNARR SCQTAMYLIA EAMTAWMAPI LSFTAQEIWE
ALPLPVSGER DEFVFTGVWF DGLMKQESKQ DESTESSDEL GNEYWTELLT VRGEVNRALE
QARKDKSVGK ALEAQVTLFA TADLAAKLAK LGDELRFVLI TSKATIETVT SAPENALETE
VEGLWLTVAP AEGIKCERCW HVTTDIGESE KHPTLCGRCI TNIDGEGETR QFA