Gene CPS_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1162 
SymbolbtuB 
ID3523005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1183704 
End bp1185572 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content39% 
IMG OID637283626 
ProducttonB-dependent vitamin B12 receptor 
Protein accessionYP_267905 
Protein GI71282530 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID[TIGR01779] TonB-dependent vitamin B12 receptor
[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CAATAATAGC ACTAAGTATA AGCAGCCTAC TTTACTCATC ACTTTCTTTT 
GCAGAGCAAA CTAGCCCTAC AACGATTGAT AAAGCAGACG AAACCATTGT CATTACTGCT
AACCGCAGTA TTCAAGACAA ATTTGATACC TTAGCTTCGG TGAATATATT CACTAGAGAA
AACATAGAAC AAATTCAGCC TTTATCTATT AGTGACTTAC TTGGCCGAGT TGCCGGTATC
TCTATTAATA CGCAAGGTAC TTCTGCGCAT AAAACGTCTG CCTTTGTACG TGGTACTAAT
TCAGACCACG TATTAGTATT AGTTAATGGA GTTCGGATTG GCTCTGCCAC ACTTGGCTCG
AAAAGTCTTG CTTCGATACC GGTACAGTTG GTTGAACGTG TAGAAGTCAT TAAAGGACCT
AGAGCTGCCT TGTGGGGATC TGATGCCATT GGTGGTGTAA TCCAAATTTT TACCCGTGAC
TTAGCTGCAG GTGAAGGCCA GGTAGGAATA AAAGTAGGCA GTGATAGCTT ATACCAAGGT
TATGGTGCAT TAGGCTTTGG TAATAAAGAA CACGGTTACA CATTAAGCGC AACGGCAGAA
AAATCTGATG GTTTTGATGT AGTTGTCCCT GATGGTAATA GCCAATATAC CGTAGATCAA
AACGATGACG ATGGTTATGA CCGTCAATCA ATAGCACTTT CTGGTACCAG TCAGTTTACT
CAAGCCTATG CACTTGAGTT AAATACACAG TACGACCAAG GCACTACTGA ATTTGATGCT
AACACCAAAT ACGGTGGTGA CGAAACCACG TATGAAAACT ACCACTTTCT ATTACGAAAC
CATCTTCAGC TAGAACAGGT GTATTTGCAA TTAGGTTTAA GTACTTCAGA AGACAGCACT
GAAGATAACT ACAGCAAATA TAACAGTCAA AATAGCGCCA GTAATGCAAA TAGCTTATTC
ACTACCAATC GTGAGCAAGT TACCGCGTTA GCTCAACTGC CATTAGCTGA CTCATCAGAA
ATCACTGCAG GATTTGAGTG GTATACAGAA AGCATTGAAA GTAATAAAGA ATATGATGAA
ACCGATAGAG ATGCTAACGC AGTTTTTGTC ACGGGTCGTC ATGATATTGA GCAAGTGAAA
TTAGAAGCTT CTGTTCGTTA TGATAAAGTA GGCGACATTG ATAGCGAGAC AACGTATCAA
GTAGCTGCGG GTTACCAAGT TAATGATCAA CTACTATTCT CACTAAGTCA CGGAACTGCT
TTCAAAGCGC CTAGCTTCAA CGACTTATAC TACCCTTGGC AAGGCAACCC TGATTTAATA
TCAGAAACCG CGGATACCTC GGAATTTTTA GCACGTTTTC AAAACGATAC TCTTTCTGCT
GAAGTATCTA TTTACCAATC AGATATTGAT AACTTAATTG AGTGGGCTCC TACTGCATCA
GGTGCATATA AGCCTTCAAA TGTTGCAAAA GCTAAAATAT TAGGTGCTGA AGCAACTTTT
ACTGCTGCTA TTTACAACAC CAATAACACA TTAACATTGA GCCATGTTGA TGCTGAAGAC
AAAACGACAG ATCATCAATT AGCTAGACGA CCAAATTTTT CTGCAAATTA TAACTTCGTT
TACTCACTCA AGCAGTTTGA TTTCACCTTT GATGTAGACT ATCAAGGTAG TAGATATGAT
GGTGCTAACG ATCCAGTAAA AACATTGAAA GCCTTTACTT TGCTTGATGT TGGTTTAAAT
TACCGACTAA ACAACCAAGT AAGTTTACTA GCGAAGGTAA CAAATCTAAC TGACAAAGAT
TATCAAACAT CAAGTGAATA TCCTGGTTCA GAGCGTGGTT ATACCCTTAC TGTAGATTAT
AAGTTTTAA
 
Protein sequence
MNKTIIALSI SSLLYSSLSF AEQTSPTTID KADETIVITA NRSIQDKFDT LASVNIFTRE 
NIEQIQPLSI SDLLGRVAGI SINTQGTSAH KTSAFVRGTN SDHVLVLVNG VRIGSATLGS
KSLASIPVQL VERVEVIKGP RAALWGSDAI GGVIQIFTRD LAAGEGQVGI KVGSDSLYQG
YGALGFGNKE HGYTLSATAE KSDGFDVVVP DGNSQYTVDQ NDDDGYDRQS IALSGTSQFT
QAYALELNTQ YDQGTTEFDA NTKYGGDETT YENYHFLLRN HLQLEQVYLQ LGLSTSEDST
EDNYSKYNSQ NSASNANSLF TTNREQVTAL AQLPLADSSE ITAGFEWYTE SIESNKEYDE
TDRDANAVFV TGRHDIEQVK LEASVRYDKV GDIDSETTYQ VAAGYQVNDQ LLFSLSHGTA
FKAPSFNDLY YPWQGNPDLI SETADTSEFL ARFQNDTLSA EVSIYQSDID NLIEWAPTAS
GAYKPSNVAK AKILGAEATF TAAIYNTNNT LTLSHVDAED KTTDHQLARR PNFSANYNFV
YSLKQFDFTF DVDYQGSRYD GANDPVKTLK AFTLLDVGLN YRLNNQVSLL AKVTNLTDKD
YQTSSEYPGS ERGYTLTVDY KF