| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1154 |
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| Symbol | |
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| ID | 3519639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1176031 |
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| End bp | 1176660 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637283618 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_267897 |
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| Protein GI | 71278155 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTACCA CTAACCAAAG CAGTTTAACA GAACTCGCTA AGCCTACTGA AAATCACCAG
CACTTCAAAA TATTTAAGCC ATATGGTTTT TTAAGTCAGT TTGTACCCGA ATCACGCAAG
AAGAAACATC TACTAGGCGA ACTATTTAAT TTCCCCGATA AAACGATGGC CATTGGGCGA
TTAGATCACG ACTCTGAAGG GTTATTATTA CTCACAACTG ACGGGATGAT GAGCTACAAA
GTCAGAGACA AAAGTATAGT AAAAGAGTAC TACGTACAAG TAGATGGAGA GATCACGACA
GACGCAATAT CACAGCTGCA AAATGGTGTT GAAATTGGTA TCAATAGCAC TAAGTATCTA
ACCATGCCTT GTAAAGCATT CAAGCTGGAC TGTGAACCTC AACTCCCCGC ACGTGGTCGT
AAAATCCGCG ATCCGAAACA TGGCCCTACT AGCTGGATCT CTATAACGCT CTGTGAAGGA
AAAAATCGTC AGATAAGAAA AATGACGGCT GCCGTGGGCT TTGCCACATT AAGACTGGTC
AGAGTTCGAA TTGGCAACAT AGGTATCGAT AACTTAATTG CCGGTGACGT TGTTGCGCTA
CCTAATTTTG GCGCTGCACT TAATCGCTAA
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| Protein sequence | MPTTNQSSLT ELAKPTENHQ HFKIFKPYGF LSQFVPESRK KKHLLGELFN FPDKTMAIGR
LDHDSEGLLL LTTDGMMSYK VRDKSIVKEY YVQVDGEITT DAISQLQNGV EIGINSTKYL
TMPCKAFKLD CEPQLPARGR KIRDPKHGPT SWISITLCEG KNRQIRKMTA AVGFATLRLV
RVRIGNIGID NLIAGDVVAL PNFGAALNR
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