Gene CPS_1136 details

Gene Information

• Locus tag: CPS_1136
• Symbol: hscA
• ID: 3522439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1157013
• End bp: 1158875
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637283600
• Product: chaperone protein HscA
• Protein accession: YP_267879
• Protein GI: 71281967
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTAT TACAAATTGC AGAACCCGGT CAAAGCACCG TTCCTCATGA ACACAGATTA 
GCTGCAGGCA TCGATCTTGG TACCACAAAT TCCTTAATAG CAAGTGTACA AAGCGGTAAC 
GCAAGTACCT TAAGTGATGA TCAAGGCCGT GATATATTGC CCTCTATTGT TAGCTATCAG 
GCAGGTAATG TTTTAGTTGG TCAAACAGCT CAAGCACTTA GCATTGAAGA TGCTCAAAAT 
ACGATTACTT CTGCAAAACG CTTGATAGGT CGCTCACTTA AAGATATTCA AAGTAAATAT 
CCTTCGTTAC CTTATGAGTT TTGTGGTGAT GAAAATCATC CTGAAATTAT GACTAGACAA 
GGTGCTGTTA ACCCAGTTCA AGTCTCGGCA GAGATATTAA AAAGCTTAAA CCTAAGAGCA 
CAAGCGGCTT TAGGTGGAGA GCTCACTGGT GTTGTTATTA CTGTCCCGGC TCACTTTGAT 
GATGCCCAAA GGCAAAGTAC CAAAGATGCG GCAAAATTGG CGGGTGTTAG TGTGTTGCGT 
CTATTAAATG AACCAACAGC TGCAGCGGTA GCTTACGGGT TAGACTCAGG CCAAGAAGGC 
GTTATTGCGG TCTATGATTT AGGCGGTGGT ACTTTTGATA TCTCTATTTT ACGTTTAAAC 
AAAGGCGTAT TTGAAGTGTT AGCAACTGGT GGTGATTCTG CGCTAGGTGG CGATGACTTT 
GATGTCGTTT TAGTTGACTA TCTTGTTGAA CAAGCCGGTT TAGTAAGACC TTTATCACCT 
TCGTTAGAGC GTCAACTGAT GCAGCAAGCT TGTTTTGCTA AAGAACAGTT AACAACTAAA 
GAGGAAGTTG ATATCACAAT TTCTCTTGAT AGTGACAGTG ATTGGAAAAC AAGTTTAACT 
AAAGCACAGT TAAATAAACT TATTAGCTCA TTAGTTAATA AAACATTACG TGCTTGTCGT 
CGTACGCTCA AAGATGCTGA TATTACTATC GATGAAGTAA TAGAAGTTGT CATGGTCGGC 
GGTTCAACTC GTGTACCTTT AGTGCGTAGC GAAGTTGAAA AACACTTTAA TAAAACACCG 
TTAACGTCAA TTGACCCTGA TAAAGTGGTT GCGATTGGCG CTGCAATTCA AGCAGATGTT 
TTGGTGGGTA ATAAACCTGA TAGTGATATG TTATTACTTG ATGTTACGCC ATTATCTCTT 
GGTCTAGAGA CTATGGGTGG TTTAGTAGAA AAAGTTATTC CACGAAACAC CACAATACCT 
GTTGCAAAAG CGCAAGAATT TACCACATTT AAAGATGGTC AAACGGCCAT GGCCGTTCAC 
GTCTTACAAG GTGAGCGTGA ATTAGTTGAG GATTGTCGTT CGTTAGCCCG TTTTGAATTA 
CGCGGCATTC CTGCAATGAC TGCTGGTGCA GCTCATATTC GTGTAACGTT TAAAGTTGAT 
GCGGATGGTT TACTCTCTGT CTCGGCGATG GAAAAGTCAT CTGGTGTGGA ATCGAGCATT 
GAAGTTAAAC CTTCTTTTGG TCTTGATGAC AATCAAATTA GTCAGATGAT CAAAGATTCA 
ATGAGCAATG CGGCTGATGA TATGCAAGCG CGTATGTTGA AAGAGCAACA AGTTGAAGCC 
TCACGCGTTA TAGAGTCTGT TCAAGCTGCT TTATTGGCTG ACAGTAAGCT ACTTAATAGT 
GATGAAATTA CGGTTATTGA AAACGCAATT AAGTCACTTG CTCAGGTTAG CCAAGGTCAA 
GAAATTAAAG CGATAGAAAA TGCACTGGAT AAGTTAAACG ACAGTACAGC AATATTTGCT 
GAACGTCGTA TGGATAGTTC AATTAGTGAA GCCCTTGCAG GCCAAGCAGT TGATAAAATT 
TAG 

 

Protein sequence

MALLQIAEPG QSTVPHEHRL AAGIDLGTTN SLIASVQSGN ASTLSDDQGR DILPSIVSYQ 
AGNVLVGQTA QALSIEDAQN TITSAKRLIG RSLKDIQSKY PSLPYEFCGD ENHPEIMTRQ 
GAVNPVQVSA EILKSLNLRA QAALGGELTG VVITVPAHFD DAQRQSTKDA AKLAGVSVLR 
LLNEPTAAAV AYGLDSGQEG VIAVYDLGGG TFDISILRLN KGVFEVLATG GDSALGGDDF 
DVVLVDYLVE QAGLVRPLSP SLERQLMQQA CFAKEQLTTK EEVDITISLD SDSDWKTSLT 
KAQLNKLISS LVNKTLRACR RTLKDADITI DEVIEVVMVG GSTRVPLVRS EVEKHFNKTP 
LTSIDPDKVV AIGAAIQADV LVGNKPDSDM LLLDVTPLSL GLETMGGLVE KVIPRNTTIP 
VAKAQEFTTF KDGQTAMAVH VLQGERELVE DCRSLARFEL RGIPAMTAGA AHIRVTFKVD 
ADGLLSVSAM EKSSGVESSI EVKPSFGLDD NQISQMIKDS MSNAADDMQA RMLKEQQVEA 
SRVIESVQAA LLADSKLLNS DEITVIENAI KSLAQVSQGQ EIKAIENALD KLNDSTAIFA 
ERRMDSSISE ALAGQAVDKI