| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1125 |
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| Symbol | |
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| ID | 3520292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1147766 |
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| End bp | 1149166 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283589 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_267868 |
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| Protein GI | 71279831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA CCCCAACCAA GTTTACTGAT TTAGGCTTAT CAGAAGCATT ACTAAAAGCA
GTACGTGATA AGGGCTATGA AACACCTTCT CCTATTCAAG CCCAAGCGAT CCCAGCAGTT
ATTTCTGGTC GTGATGTCAT GGCAGCCGCA CAAACAGGTA CGGGTAAAAC GGCAGGGTTT
ACTTTGCCAT TATTACAGCG CCTTTCTAGC AGTAAAGGTA ACAAGGTTTC ATCTAACAAC
GTAAGAGCGC TAATATTAAC GCCTACTCGC GAGTTAGCTG CACAAATAAG CGAGAGCATT
GAGGTTTACG GTAAGTATTT AAACTTACAC TCAATGGTTG TTTTTGGTGG TGTTAAAATT
AATCCACAAA TAGCGCGTCT TCGCCAGGGT GTTGATGTAC TTGTGGCAAC ACCAGGTCGT
CTATTAGATT TATACAATCA AAGAGCAGTT AAGTTTAGCC AACTTGAAGT CTTTATTCTT
GATGAAGCTG ATCGTATGTT AGATATGGGC TTTATTCGCG ATATTAAAAA GTTGATGACA
GCTTTGCCAA AAGACCGTCA AAACTTACTA TTCTCAGCAA CATTTTCACC TGAGATACGT
GCATTAGCTA AAGGCATGGT AAATAACCCA TTAGAAATTT CAGTTGATGC AGAAAATAGC
ACAGCAGAAA AAGTGACTCA ATGGTTAACT GCGGTTGATA AAAAACGCAA ACCTGCTGTA
TTAACGCACT TAATAAAAGA AAATAATTGG CAACAAGTCT TAGTTTTTAC TAAAACCAAA
CATGGTGCTA ATAAGCTAAC AAAGCATCTT GAAGCTGAAG GGCTAACTGC GGCGGCTATT
CATGGTAATA AAAGCCAAGG AGCGCGTACT AAAGCACTTG CTGCCTTTAA AGATGGTTCA
GTGAAAATAT TAGTAGCAAC TGATATTGCA GCACGTGGTA TTGATATTGA TTTGTTACCA
CAAGTGGTTA ATTTCGACCT ACCTAATGTA CCTGAGGATT ATGTTCATCG TATTGGTAGA
ACAGCCCGTG CAGGTAATAC CGGACAAGCA TTATCTCTAG TGTGTGCCGA TGAATTAGAT
TTATTGTGGG GCATTGAACA TGTTATTCAG CAGCACATCG AACGAAAAGT GATTGAGAAG
TTTATACCCG CTAATGAATT AGGCGAATCA CGTGTTATCA AACCTTTAAA ACAAGGTAAA
CCACCAAAAT CAGCAAAACC TCATGGGGCA GGTAAGGGCA GAGTTGAGCA CAAAGATGGT
CAACGTTCAG GTCGTAATGC TAACGGGAAC AATGCAGGTG GAAATAAAGC AAAACCGGGC
AATGATTCTT CTAGACGTAA AAAACCTGAA TACGATGGTA CTGGTCCTAA ACCACGTAGA
GCTATACGCC CTACAAAATA A
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| Protein sequence | MSDTPTKFTD LGLSEALLKA VRDKGYETPS PIQAQAIPAV ISGRDVMAAA QTGTGKTAGF
TLPLLQRLSS SKGNKVSSNN VRALILTPTR ELAAQISESI EVYGKYLNLH SMVVFGGVKI
NPQIARLRQG VDVLVATPGR LLDLYNQRAV KFSQLEVFIL DEADRMLDMG FIRDIKKLMT
ALPKDRQNLL FSATFSPEIR ALAKGMVNNP LEISVDAENS TAEKVTQWLT AVDKKRKPAV
LTHLIKENNW QQVLVFTKTK HGANKLTKHL EAEGLTAAAI HGNKSQGART KALAAFKDGS
VKILVATDIA ARGIDIDLLP QVVNFDLPNV PEDYVHRIGR TARAGNTGQA LSLVCADELD
LLWGIEHVIQ QHIERKVIEK FIPANELGES RVIKPLKQGK PPKSAKPHGA GKGRVEHKDG
QRSGRNANGN NAGGNKAKPG NDSSRRKKPE YDGTGPKPRR AIRPTK
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