| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1123 |
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| Symbol | secF |
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| ID | 3521700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1146575 |
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| End bp | 1147522 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283587 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_267866 |
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| Protein GI | 71281229 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTT TACAATTAAA AGAAACTGTC AACTTTATGA GCTATCGCAA GATAGCCTTA
GTATTTAGCG CCTTATTAAT GATTGCTTCA ATCTTCTCTC TAGCCACTAA TAAACTGAAC
TTTGGTTTAG ATTTTACTGG CGGTACTTTG ATTGAAGTTG GTTTTCAAGA AGCAGCAGAT
TTAGAAAAGC TTCGTTTAGT GATGAAAACT AATGGCTTTG CTGATGCGAA AGTGCAATTT
TATGGTAGTA GCCGTGATGT TGTGATTCGT TTAGGTTTAC GTGATGACGT TAAAGCTGAA
ATGCTTGGCA ATGAAGTACT TGATGTCTTA CAAGGAGCGA CTGGCCAAAC GGTTGATATG
CGTCGTATTG AGTTTGTTGG CGCAAGCGTT GGTGATGAGT TAGCAGAGCA GGGTGGTTTA
GCTATGCTAA CAGCGCTGAT CTGTATTTTG ATTTACGTTG CTTTTCGATT TGAATGGCGC
TTTGCTGTAG GCTCAGTGGT AGCGTTATTT CACGATGTAT TATTAACACT TGGTTTGTTT
TCAATTTTAC AACTAGAGTT TGATTTAACT GTACTTGCAG CGATATTAGC TGTGATAGGT
TACTCACTTA ACGATACTAT TGTTGTTTCA GACCGTATTC GTGAAAACTT TAGAAAAGTG
CGCAACAGTG AAGCTGAAGA AATAATTAAT ATCTCTTTAA CGCAAACATT AAGTCGAACT
TTTATTACCT CAATTACCAC ACTATTAGTT CTAGCTGCTT TGTTCTTTCA AGGTGGAGCA
CTGATTCATG GTTTTGCCAC GGCATTATTA TTCGGTGTTT TTGTTGGTAC TTACTCTTCA
ATTTATGTTG CTAGTTTAGT GGCATTATCT CTAGGTATTT CAAAAGAAGA TTTAATACCT
GAAGTCATTG AAAAAGAAGG TGCAGATCAA GAAGCTATGA TGCCTTAA
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| Protein sequence | MQILQLKETV NFMSYRKIAL VFSALLMIAS IFSLATNKLN FGLDFTGGTL IEVGFQEAAD
LEKLRLVMKT NGFADAKVQF YGSSRDVVIR LGLRDDVKAE MLGNEVLDVL QGATGQTVDM
RRIEFVGASV GDELAEQGGL AMLTALICIL IYVAFRFEWR FAVGSVVALF HDVLLTLGLF
SILQLEFDLT VLAAILAVIG YSLNDTIVVS DRIRENFRKV RNSEAEEIIN ISLTQTLSRT
FITSITTLLV LAALFFQGGA LIHGFATALL FGVFVGTYSS IYVASLVALS LGISKEDLIP
EVIEKEGADQ EAMMP
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