Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1121 |
Symbol | yajC |
ID | 3521638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1144168 |
End bp | 1144503 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283585 |
Product | preprotein translocase subunit YajC |
Protein accession | YP_267864 |
Protein GI | 71281167 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.131891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAT TTATCAGTAC AGCACACGCC GCAGCAGCAC CAGCAACAGC CGGTGGCGGA ATGGAAATGA TCATTATGCT AGCCGTTTTT GGTTTAGTGT TTTTCTTCAT GATCTATCGT CCACAAGCTA AACGTGTAAA AGAGCACAAA GGTTTAATGT CTTCATTAGG TAAAGGCGAT GAAGTCTTAA CACAAGGCGG TATTGTTGGC AAAATCGTTA AAGTATCTGA TGAGAAAGAT TTTATCGTTG TTAGTATTAG CGAAGGCACT GAAGTTACAG TACAAAAAAG CGCCATAAAC GCAGTACTTC CAAAAGGCAC AATGAAATCA TTGTAG
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Protein sequence | MSLFISTAHA AAAPATAGGG MEMIIMLAVF GLVFFFMIYR PQAKRVKEHK GLMSSLGKGD EVLTQGGIVG KIVKVSDEKD FIVVSISEGT EVTVQKSAIN AVLPKGTMKS L
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