Gene CPS_1084 details

Gene Information

• Locus tag: CPS_1084
• Symbol: nqrE
• ID: 3523016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1103859
• End bp: 1104482
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637283548
• Product: Na(+)-translocating NADH-quinone reductase subunit E
• Protein accession: YP_267828
• Protein GI: 71282541
• COG category: [C] Energy production and conversion
• COG ID: [COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE
• TIGRFAM ID: [TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACATT ATTTAAGTAT TTTTATTAAA ACCATTTTCA TTGAGAATAT GGCGTTAAGC 
TTCTTCTTAG GTATGTGTAC TTTCTTAGCA GTATCAAAGA AAGTTAGCAC AGCGATTGGC 
TTAGGTGTTG CAGTTGTTGT AGTGCTCGGT TTAGCGGTTC CTGCTAACCA AATCATCTAC 
CAAGCAATTT TAGCACCGGG TGCACTTGAC AGCTTAATGG GGATTACTGA TCCGAAAGAA 
TCAATTGACC TTAGCTTTTT GTCATTTATT ACCTTTATCG GGGTAATTGC TGCTTTAGTA 
CAAATTTTAG AAATGCTTTT AGATAAGTAT TTCCCAGCTT TGTATCAAGC GCTTGGCATC 
TTCCTACCTT TAATCACGGT TAACTGTGCC ATTTTTGGTG CCGTTTCCTT TATGGTTGCG 
AAAAACCTTA CCCTTGGCGA AAGTGTCGTT TACGGCGTTG GCTCAGGTAT AGGTTGGATG 
TTAGCCATTG TATTGATGGC TGGTTTGCGC GAAAAGATGA AATATTCTGA TGTACCAAAC 
GGTTTGAAAG GTTTAGGTAT TACATTTATT ACTGCTGGAT TGATGGCTTT TGGCTTTCTT 
TCTTTCGGTG GTATTTCGTT ATAA 

 

Protein sequence

MEHYLSIFIK TIFIENMALS FFLGMCTFLA VSKKVSTAIG LGVAVVVVLG LAVPANQIIY 
QAILAPGALD SLMGITDPKE SIDLSFLSFI TFIGVIAALV QILEMLLDKY FPALYQALGI 
FLPLITVNCA IFGAVSFMVA KNLTLGESVV YGVGSGIGWM LAIVLMAGLR EKMKYSDVPN 
GLKGLGITFI TAGLMAFGFL SFGGISL