| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1079 |
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| Symbol | rpoS |
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| ID | 3519032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1098522 |
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| End bp | 1099412 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283543 |
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| Product | RNA polymerase sigma factor RpoS |
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| Protein accession | YP_267823 |
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| Protein GI | 71278347 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAAT TAAAAGAACA AAAAAAAACT ATTGAATCGA AGGAAGATGC ACCGTCAAAC
CTAGACGCTA CACAGATTTA TTTAAGTGAA ATAGGTTTTT CACCGCTATT AACCGCTGAA
GAAGAAGTTT ACTTCTCACG TCTAGCCCTC AAAGGGGACG AACCATCAAG AAAACGGATG
ATAGAGAGTA ATCTACGTTT AGTTGTGAAA ATAGCCCGAC GTTATAATAA TCGCGGACTA
CCTTTACTTG ATTTAATTGA AGAAGGAAAC TTAGGCTTAA TTAGAGCCGT TGAAAAATTT
GACCCTGAGC GAGGCTTCCG CTTTTCAACT TATGCTACGT GGTGGATACG CCAAACCATT
GAACGGGCAA TAATGAACCA AACCCGTACT ATTCGATTAC CCATTCATGT TGTTAAAGAA
CTTAATATTT ATTTACGTGC TTCTCGTGAA CTAATTCAAA AACTCGATCA CGAACCTACC
GCCGAAGATA TCGCACAGCA CCTAGATAGA CCTGTTGCCG ACGTTAATAA AATGTTGCGA
TTAAACGAAC GTATTGCCTC TGTAGATACC CCTTTTGCAG GAGAGTCAGA TAAAGCTTTA
TTAGATGTTA TAGCTGATGA AAAAAGTACC GGCCCTGAAA GTGATTTACA GTCAGAAGAT
ATGAGTAATA ATATTATTCA TTGGTTAAAT GAGCTTAATA CCAAACAAAG GGAAGTGTTG
GCTAGACGTT TTGGTTTACT TGGATATGAA GCATCAACGC TAGAAAATGT TGGCCGTGAG
ATTGGTTTAA CACGTGAACG CGTTCGTCAA ATCCAAGTTG AAGCATTAAA ACGTTTACGT
GACATTTTAT CCCAACAAAA CTTGTCAATA GAGGCTATTT TTCAAGCCTA A
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| Protein sequence | MVKLKEQKKT IESKEDAPSN LDATQIYLSE IGFSPLLTAE EEVYFSRLAL KGDEPSRKRM
IESNLRLVVK IARRYNNRGL PLLDLIEEGN LGLIRAVEKF DPERGFRFST YATWWIRQTI
ERAIMNQTRT IRLPIHVVKE LNIYLRASRE LIQKLDHEPT AEDIAQHLDR PVADVNKMLR
LNERIASVDT PFAGESDKAL LDVIADEKST GPESDLQSED MSNNIIHWLN ELNTKQREVL
ARRFGLLGYE ASTLENVGRE IGLTRERVRQ IQVEALKRLR DILSQQNLSI EAIFQA
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