| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1078 |
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| Symbol | |
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| ID | 3518683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1097561 |
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| End bp | 1098412 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637283542 |
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| Product | putative lipoprotein NlpD |
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| Protein accession | YP_267822 |
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| Protein GI | 71277883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT TTCGACTAGC TAAATACTTA TTTACTTACG TTATTTTTGC GATCACTCTT
TTCTCTTGTA GTAGCCGCAA TACACCTGCA CCTGTATCAA ATATTGTGCT AGGAGAACGT
AATCAAGACT CTATTAGGAC TTCGCAATAT CTTGTTAAAA AAGGAGAAAC TCTCTATTCG
ATTGCATGGC GTGCGAACTC AGACGTTAGA AAAATTGCTC GGATAAATAA AATCTCCTCG
CCGTATCGAA TATATCCAGG ACAAAAAATA TTTTTAGTTG AATCTAAGGT TAAAAAAACA
GCGGAAGTAA GTAAACACAA GGTATCACAT AAAAATTCGA CTAAAAGCTC TACCGCTAAT
AAAAAAAATG GCTCAAAAAA TACACTTGCA TCTACTAAAA AGCAGGCGTA TGGTGAAAAT
GTAAGCACTC GAAAATCATA CCAAAACAGC ACTTTAGCAT CGGAAAAGTT TTCACAAAAA
ATTAGTCGAT GGCAATGGCC GGTTAAGGGC AAAGTTGTAG AGTATTTTTC AAATAGTGCA
CAGGGTAATA AAGGCATAGA TATTACAGGC CGTCGCGGAA CAAAAATTAA AGCGTCGACG
ACAGGTAAAG TGGTATACGC AGGTAATGCC CTTAGGGGCT ACGGTAAACT CATTATTATA
AAACATAACG ATGACTATTT AAGTGCATAT GCCCATAATG ATCGTATTCT CGTTAAAGAG
CAGCAGATCA TAAATATCGG TGATGTTATT GCCACCATGG GTGACACTGA TGCCAACAAA
GTAATGCTTC ATTTTGAGAT ACGCTTTCGA GGGAAATCAG TTAATCCTTT AAAATATTTA
CCAAAAAAAT AA
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| Protein sequence | MSFFRLAKYL FTYVIFAITL FSCSSRNTPA PVSNIVLGER NQDSIRTSQY LVKKGETLYS
IAWRANSDVR KIARINKISS PYRIYPGQKI FLVESKVKKT AEVSKHKVSH KNSTKSSTAN
KKNGSKNTLA STKKQAYGEN VSTRKSYQNS TLASEKFSQK ISRWQWPVKG KVVEYFSNSA
QGNKGIDITG RRGTKIKAST TGKVVYAGNA LRGYGKLIII KHNDDYLSAY AHNDRILVKE
QQIINIGDVI ATMGDTDANK VMLHFEIRFR GKSVNPLKYL PKK
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