Gene CPS_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_1068 
Symbol 
ID3523305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp1090765 
End bp1091883 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content38% 
IMG OID637283532 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_267812 
Protein GI71278947 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG TGATTAGTGG AACTGGGTTG TACACGCCAA CCCAGAGCAT CTCAAATGAT 
GAATTAGTAC ACTGTTTTAA CCAATACGTA GAGAAATTTA ATCTTACTCA TAGTCAGGAG
ATTGAAGCAG GCAAGATCGT CGCGCTATCT CCATCAGACA GTAGTTTTAT TGAAAAAGCT
TCGGGCATAA AAAGCCGTTA TGTCATGGAG AAAGAAAGCA TTTTAAATGT CGATATTATG
TCGCCACGTT ATACCGAACG TGATAATGAC CAACTCTCTA TGCAGGCCGA GATAGGTGTT
GCAGCAGCTA AGGAAGCGAT GTTAGCTGCC AATAAAACAC CAGCCGATAT TGATCTTATT
ATTGTTGCCT GTGCTTATAC CCAGCGTTCG TATCCTGCTA TGGCGATTGA AATACAGAAT
GCCCTTGGCT GTGGTGGTTG GGGGTTTGAT ATGTTGGTCG CTTGTTCGGC AGCAACGTTT
GGCATTATCA ATGCAGCAAA TGCTATTCGT AGTGGCACAG CAAAAACAGT GTTGGTCATT
AACCCTGAAA TACTATCACC ACAAATTAAT TATCGAGATA GAGATAGTCA TTTTATTTTT
GGTGATGTAG CAACGGCATC AATTATCGAA GATGAAAGTA CCGCTAATGC GGAGCATGTT
TTTAAAATCA TCAGTGAAAA ACCAATGACC AGTTTTTCTA ATAATATTCG TAGTAATATT
GGTTATATGA ATAACTGTAG TCCAGAAAAC TCGGATAATG ATGACAAATT CTTTATCCAG
CAGGGACGAA AAGTGTTTAA AGAAGTTTTG CCTATGGTCT CTAATTTAAT TACCAGTGAA
ATGGCAAAAA TGGATATAGG TGCTGATGAC ATTAAGCGAT TATATTTACA CCAAGCTAAT
ATCAATATGA ATAATTTCAT TGGTAAAAAA GTTCTTGGAA GAGAACCAAG CAGCGCTGAA
GCGCCTATTA TATTAGATGA ATATGCAAAT ACGAGTTCAG CAGGTTGTAT TATTGCTTTG
CACAAAAATA AACAGGACCT AGCGACTGGA GACAAAAGTG TATTATGTTC TTTTGGTGCA
GGATACTCAG CATGCTGTTT ATTGTTGGAA TATGTCTAA
 
Protein sequence
MAVVISGTGL YTPTQSISND ELVHCFNQYV EKFNLTHSQE IEAGKIVALS PSDSSFIEKA 
SGIKSRYVME KESILNVDIM SPRYTERDND QLSMQAEIGV AAAKEAMLAA NKTPADIDLI
IVACAYTQRS YPAMAIEIQN ALGCGGWGFD MLVACSAATF GIINAANAIR SGTAKTVLVI
NPEILSPQIN YRDRDSHFIF GDVATASIIE DESTANAEHV FKIISEKPMT SFSNNIRSNI
GYMNNCSPEN SDNDDKFFIQ QGRKVFKEVL PMVSNLITSE MAKMDIGADD IKRLYLHQAN
INMNNFIGKK VLGREPSSAE APIILDEYAN TSSAGCIIAL HKNKQDLATG DKSVLCSFGA
GYSACCLLLE YV