| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1067 |
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| Symbol | |
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| ID | 3520929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1089548 |
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| End bp | 1090573 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283531 |
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| Product | putative ABC transporter, permease protein |
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| Protein accession | YP_267811 |
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| Protein GI | 71280463 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCA AACGTTTTTT TGCTGTTTTT AAAGCACGAA ATATTGAATT TTTCCGTGAT
AAGTCATCAC TCGGTTGGAA TCTATTTTTT CCAATTCTAT TACTGGTCGG TTTTTCCTTT
ATTTTTTCAG GTGATGGTCG CCCAGCCTAT AAAATAGGCT TGCTGGTAGA TCAAGGTCAA
TTACAACATG AAAATGCAGC GCAAACATCG CTTACTGAAT TACGCTTTAT TGATTTTATT
AACTATAAAG ATCTTGCGTT AGCAAAAGCA AAGCTTAGCC GTCACAGTCT CGATTTGTTA
GTTGACTATG ATGCTAAGCG TTATTGGGTG AATGAAGAAT CATCCAAGAG TTATTTAGTT
GAAAAAATAT TCCTTGGTCA ACAGTCAGGA TTTACTCGCC TACAAAGTAG TGGCAAGAAC
ATTCGTTATG TTGATTGGGT GCTACCTGGA ATACTGGGTA TGAATATGAT GTTCAGTTGC
CTATTTGGTG TTGGTTATGT CATCGTACGT TATCGAAAAA ACTCAGTATT AAAGCGTTTA
AAAGCAACGC CACTGTCTGC TTTTGAATTT GTTTCTGCGC AATTATTATC ACGGCTATTC
ATTGTTATGT TCATGTCAAC GGTGGTTTAT AGTGGCTGTA ATATCTTTTT CGACTTTTTC
ATGCTGGGAA GCTATGTAGA CCTTTTCATT ATCGGCGCAT TAGGTGCTTT TTGTTTAATT
AGCCTAGGGC TACTGGTAGC AAGTCGCAGT AAAAGTGAAG AGCTTATTGG CGGCCTTTTA
AATGTAACCT CTTGGCCGAT GATAATGCTT TCAGGCGTGT GGTTTAGTTT AGAAGGAGCA
CCTGAGGGAT TAAAAATATT AGCAGATTTT ATGCCGCTTA CTCACTTAGT TGCTGGCGCA
AGAGCCGTTA TTACTGAAGG TGCCACACTA AGTGATATTA GTTTTCATGT TAATATATTA
TTGCTGATGA GTAGTGTCTT TTTGGCATTA GGGGCTTATT TGTTTAGTTG GAATACTGAA
CGTTAA
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| Protein sequence | MNFKRFFAVF KARNIEFFRD KSSLGWNLFF PILLLVGFSF IFSGDGRPAY KIGLLVDQGQ
LQHENAAQTS LTELRFIDFI NYKDLALAKA KLSRHSLDLL VDYDAKRYWV NEESSKSYLV
EKIFLGQQSG FTRLQSSGKN IRYVDWVLPG ILGMNMMFSC LFGVGYVIVR YRKNSVLKRL
KATPLSAFEF VSAQLLSRLF IVMFMSTVVY SGCNIFFDFF MLGSYVDLFI IGALGAFCLI
SLGLLVASRS KSEELIGGLL NVTSWPMIML SGVWFSLEGA PEGLKILADF MPLTHLVAGA
RAVITEGATL SDISFHVNIL LLMSSVFLAL GAYLFSWNTE R
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