| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1057 |
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| Symbol | napA |
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| ID | 3520335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1081594 |
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| End bp | 1084092 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637283521 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_267801 |
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| Protein GI | 71279873 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTA ATCGCCGCGA ATTTATAAAA GCAAATGCGA TTGCAGCAGC CGCTGCTGTT
GCTGGGGTAT CTGTACCTGC AGTAGCCTCT AACTTAATTA CCAGCTCCGA TATTACTAAA
CTTAAGTGGG ATAAAGCTGC TTGTCGTTTT TGTGGTACAG GCTGTAGTGT TAATGTAGGC
GTTATGGATG GCAAAGTTGT TGCTACCCAT GGCGATATTA AATCACCTGT GAACAAAGGT
CTTAGTTGTG TGAAAGGTTA TTTCCTTTCA AAAATCATGT ACGGCAAAGA CAGACTTACC
ACTCCTTTAT TACGTATGAC CAACGGTAAA TACGATAAAG AAGGTGAATT CACTCCTATT
TCTTGGGATC AAGCTTTCAA TGTAATGGCT GAAAAAGCTA ATGATGCATT GAAGAAAGAT
GGTCCAGAAG CACTTGGTAT GTTCGGCTCT GGTCAATGGA CTGTTCAAGA AGGTTATGCT
GCAGTTAAAT TGATGAAAGC AGGCTTTCGT ACTAACAATA TTGATCCTAA TGCTCGTCAC
TGTATGGCGT CTGCTGTTGG TGGCTTTATG CGTACCTTTG GTATCGATGA GCCTATGGGC
TGTTACGATG ATTTAGAAGC TGCTGATGCC TTTGTATTAT GGGGCTCAAA CATGGCAGAA
ATGCATCCTA TTTTATGGAC GCGTTTAACT GATCGTCGTT TAAGTGCACC CCATGTAAAA
GTTGCTGTAT TATCTACTTT TGAGCACAGA AGTTTCGATT TAGCCGATAA CGGCATGATC
TTCACGCCAC AAACTGATTT AGCTATTTTA AACTACATTG CTAACTATAT TATTCAAACT
GGTCGCGTAA ACAAAGACTT TGTAAGTAAA CATACAAACT TTAGATTAGG CGAAACAGAT
ATAGGTTACG GTTTACGTCC TGAGCATCCG CTAGAACAAA AAGCTAAAAA CAACGGTAAA
ACTAAAGGCA GCTCTACGCC AATTGACTTT GATGAATACG CAAAATTTGT TAGCACATAT
ACGGTTGAAT CCGTATCAAA ACTTTCTGGT GTTCCTGAGC ATAAGCTAAA AGAATTAGCT
GAGATGTATG CGGATCCAAA AATCAAAGTA ACATCATTTT GGACTATGGG CTTTAACCAA
CATACTCGTG GTGTTTGGGC CAATAACCTA GTTTATAACA TTCACTTGTT AACAGGTAAA
ATCTCAACTC CTGGTAACAG CCCGTTTTCA TTAACAGGTC AACCTTCCGC GTGTGGTACT
GCTCGTGAAG TAGGTACTTT CTCACATCGT TTGCCTGCCG ATATGGTTGT TAAAAACCCT
AAGCATCGTG CTATTGCTGA GAAAATTTGG GACTTGCCTG AAGGCACTAT TCCAGCAAAA
CCTGGTTACC ATGCCGTTTT ACAAAACCGT ATGCTTAAAG ACGGTAAGTT AAACTTCTAC
TGGGTGCAGT GTAATAACAA CATGCAAGCT GCCGCTAACA TCAATGAAGA AGCTTACCCT
GGTTACCGTA ACCCGAAAAA CTTTATTGTA GTATCAGACC CGTATCCAAC AGTTACCGCA
CAGGCAGCTG ATTTAATTTT ACCAACAGCA ATGTGGGTAG AAAAAGAAGG TATGTATGGT
AATGCCGAGC GTCGTACACA ATCTTGGTAC CAAATGGTTG AAGCTCCAGA AGGTGCTAAA
TCAGATATGT GGCAATTAGT AGAATTCTCT AAACGCTTTA AAGTAGAAGA TGTTTGGCCA
GAAGAGCTGA TTGCTAAAAA GCCTGAAGTT CGTGGTAAAA CGTTATTTGA TGTGCTTTAT
AAAGACGCCT CTGTTGGTAA GTTCCCACTG TCGGAAATAC CTGAAGATCG TTTAAATGAC
GAGTCTCGTG ATTTTGGTTT CTATATCCAA AAAGGCTTAT TTGAAGAATA TGCCAGCTTT
GGTCGTGGTC ATGCCCATGA TTTAGCACCA TATGACAGAT ACCATAAAGA GCGTGGTTTA
CGCTGGCCTG TTGTTAATGG TAAAGAAACT AAATGGCGCT TTAAAGAAGG TTCTGATCCG
TATTGTAAAC CTGGTAGTGA CTGGGACTTC TACGGAAAAC CTGATGGCAG AGCTGTTATC
TTCGCTCTAC CTTATGAGCC TGCAGCTGAG TCTCCAGATG AAGAATACGA CTTATGGTTA
TCTACCGGTC GTGTACTAGA ACATTGGCAT TCAGGTTCAA TGACACAACG TGTACCTGAG
TTATATAAAG CGATGCCTGA TGCATTAGTT TACATGCACC CTGATGATGC AAAAAAACGT
AACATGCGCC GCGGTGATTT AGTGAAGCTT ATTTCTCGAC GTGGTGAAGT ACAAACACGT
GTTGAAACAA GAGGCCGTAA TAAGCCACCT GTTGGTTTAG TGTATATGCC TTGGTTTGAT
GCCAGTCGTT TAGTTAACAA AGTCACTTTA GATGCCACCG ATCCGTTATC GAAAGAAACA
GATTATAAAA AGTGTGCTAT TAAAATTGTT AAAGTTTAG
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| Protein sequence | MTINRREFIK ANAIAAAAAV AGVSVPAVAS NLITSSDITK LKWDKAACRF CGTGCSVNVG
VMDGKVVATH GDIKSPVNKG LSCVKGYFLS KIMYGKDRLT TPLLRMTNGK YDKEGEFTPI
SWDQAFNVMA EKANDALKKD GPEALGMFGS GQWTVQEGYA AVKLMKAGFR TNNIDPNARH
CMASAVGGFM RTFGIDEPMG CYDDLEAADA FVLWGSNMAE MHPILWTRLT DRRLSAPHVK
VAVLSTFEHR SFDLADNGMI FTPQTDLAIL NYIANYIIQT GRVNKDFVSK HTNFRLGETD
IGYGLRPEHP LEQKAKNNGK TKGSSTPIDF DEYAKFVSTY TVESVSKLSG VPEHKLKELA
EMYADPKIKV TSFWTMGFNQ HTRGVWANNL VYNIHLLTGK ISTPGNSPFS LTGQPSACGT
AREVGTFSHR LPADMVVKNP KHRAIAEKIW DLPEGTIPAK PGYHAVLQNR MLKDGKLNFY
WVQCNNNMQA AANINEEAYP GYRNPKNFIV VSDPYPTVTA QAADLILPTA MWVEKEGMYG
NAERRTQSWY QMVEAPEGAK SDMWQLVEFS KRFKVEDVWP EELIAKKPEV RGKTLFDVLY
KDASVGKFPL SEIPEDRLND ESRDFGFYIQ KGLFEEYASF GRGHAHDLAP YDRYHKERGL
RWPVVNGKET KWRFKEGSDP YCKPGSDWDF YGKPDGRAVI FALPYEPAAE SPDEEYDLWL
STGRVLEHWH SGSMTQRVPE LYKAMPDALV YMHPDDAKKR NMRRGDLVKL ISRRGEVQTR
VETRGRNKPP VGLVYMPWFD ASRLVNKVTL DATDPLSKET DYKKCAIKIV KV
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