| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1053 |
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| Symbol | pdxH |
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| ID | 3522466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1078913 |
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| End bp | 1079566 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637283517 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_267797 |
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| Protein GI | 71281994 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTTAT TTGAAAAACT GCGTTGCCTG TTTACCTTTG GTCAAGGCGT CGCTTTACCT
CTTCCTGAAC TCTCTTCTAA CACAACGCCC GATCAAATAT TTGAACAATG GTTTGCTGAT
GCAAATAAGT CAGGGATATT GCTACCGGAA GCTATGTCTG TCAGTAGCTG TAATAGTGAC
GGACAACCTA GTTCTCGCAT GGTCCTACTC AAAGATTATG ATAAAGAGGG GTTTGTGTTT
TTTACTAATT ACGAAAGCCG TAAAAGCCAT GAGCTAGCTG AAAACAATAA AGTAGCCTTA
TTGTTTCACT GGAATGTCTT ACAACGACAA ATTCGTATTG AAGGTACGGT TGAAAAAGTA
TCTATACAAG AATCTGCTGA TTACTTTCAT AGTAGAGACA GAGGTAGTCA AGTTGGTGCT
TGGGCATCAA AGCAAAGTCA AAAACTTAAA TACGATGATG AACTCAAAGA GCGCATGAGC
CATTATCAAG ATAAGTTTTC AGAAGGTGAA GTACCTCATC CTGAGTTTTG GGGAGGATGG
CGAGTAAAAC CTCATGCTAT TGAGTTTTGG CAAGGTCGAG CTAATCGTTT ACATGACCGC
CTATGTTTTG AAAAAGATGG TGAAACATGG CTTAACCACA AATTAAATCC TTAA
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| Protein sequence | MTLFEKLRCL FTFGQGVALP LPELSSNTTP DQIFEQWFAD ANKSGILLPE AMSVSSCNSD
GQPSSRMVLL KDYDKEGFVF FTNYESRKSH ELAENNKVAL LFHWNVLQRQ IRIEGTVEKV
SIQESADYFH SRDRGSQVGA WASKQSQKLK YDDELKERMS HYQDKFSEGE VPHPEFWGGW
RVKPHAIEFW QGRANRLHDR LCFEKDGETW LNHKLNP
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