| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1042 |
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| Symbol | alaS |
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| ID | 3519393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1068783 |
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| End bp | 1071413 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283506 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_267790 |
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| Protein GI | 71279113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAA GCACCGCAGA AGTCCGTCAG GCATTTTTAG ATTTTTTTGC CACCAAACAA
CATCAAATAG TTAAAAGTAG CTCACTTGTT CCTGGTAATG ATGCAACGTT ATTATTTACC
AATGCAGGCA TGGTTCCTTT TAAAGATGTT TTTTTAGGTG CTGAGACACG TAGTTATACA
CGAGCAACCT CTGCACAACG CTGTGTACGA GCCGGTGGTA AGCATAACGA TTTAGAAAAT
GTTGGCTACA CTGCACGTCA TCACACTTTT TTCGAAATGA TGGGTAACTT TAGTTTTGGT
GATTACTTCA AAAATGATGC AATTAGTTAT GCTTGGGAGT TTTTAACTGG CGAGTTAGGG
TTAGCAAAAG AAAAGTTATT AGTCACAGTA TATGCCACGG ATGAAGAAGC TTTCTCTTAC
TGGAGAGATG AGGTTGGTGT ACCTGAAGAT AAAATAATTC GTATTGGTGA TAAGTCAGCT
AACAAAAAGT ATGAATCAGA CAACTTCTGG TCAATGGGTG ATACAGGCCC TTGTGGACCT
TGTTCTGAAA TATTCTATGA TCACGGGGAA GACATCTTCG GCGGACCTCC AGGATCGCCT
GATGAAGATG GTGACCGTTT TATAGAGATA TGGAACATAG TATTTATGCA GTTTAACCGT
CAAAGTGACG GCCGCATGGA TCCGTTACCT AATCCATCTA TCGATACTGG TATGGGTTTA
GAGCGTATTT CTGCAATTAT GCAAAATGTG CATAGCAACT ATGAAATTGA TATTTTCCAA
GCACTAATTA AAGATACTGC TGCATTACTT GATTGCAGTG ATCTTGAGCA TAAATCACTA
CGTGTTATTG GTGACCATAT TCGCTCATGT AGCTTTTTAA TTGTTGATGG GGTTGTACCG
TCAAATGAAG GCCGAGGTTA TGTACTTCGC CGCATTATTC GTCGTGCTAT TCGTCATGGT
CATAAACTAG AAGCGACAGG ACATTTCTTC CATAAACTTG TTGCCTCATT AATTGCTCAA
ATGGGAGAAG CCTATCCAGA GTTGGCTCAG CAACAAGCAA TTATTGAAAA ACTATTACGC
ATTGAAGAAG AGCAGTTTGG TCGAACTCTC GATCGTGGCA TGATCTTATT AGAAGATATT
TTAGCTAATT TATCTGGCGA TATTATTAAA GGTGATGACG TATTTAAGCT GTACGATACC
TACGGTTTTC CTGCCGACTT AACGGCAGAT ATTGCCCGAG AGCGTAACTT GAAAATTGAT
AAAGATGGTT TTGATGTTGC GATGAAGCAA CAGCGAGAGC GTGCCCAGCA AGCAAGTCAA
TTTGGCACTG ATTATAATCA ACAACTTAAA TCTGACCAGA ATACAGCTTT TAAAGGCTAC
GATAATGACT CATATTCAGC GACTGTTGTT GAGCTATTTA ACAGCCAAGA TCAAGACCCG
GTTAGTCAAC TAAACTCAGG TGAACAGGGC ATTGTGATAT TAGATCATAC GCCATTTTAC
GCTGAATCAG GCGGTCAAGT AGGTGATAGT GGCTTACTTC ACCTTGATGG CGGAGTATTT
GAAGTAACAG ATACAATCAA ATTAGGTAAT GCTTTTGCTC ATAGAGGTAC AGCTCATACC
GATGTTGGTT TGAATCGTCG AGTAAAAGCT GAAATTAATG TTGAGCGCAG AGCGGCTATT
GTTAAAAACC ATACCGCAAC ACATTTATTG CATGAAGCAT TGCGCAAAGT ATTAGGTGAG
CATGTTACAC AGAAGGGGTC ATTATGTGAT AGTGATAAGT TACGTTTTGA TTTCTCTCAT
TTTGAAGGCG TTACCGCTCA AGAATTACAT GATGTTGAGC AAATGGTTAA CAATGAAATT
CGACGCAACC ATGCAAAACA AACCGAATCA ATGTATATCG AAGAAGCTAA AGCAAAAGGC
GCTATGGCTC TCTTTGGTGA GAAGTATGAT GATGAAGTTC GTGTAGTAAC ACTCGGTGAT
TTTTCAATAG AGCTTTGTGG TGGTGTGCAT GTTAATAGAA CCGGTGATAT CGGTTTCTTA
AAAATAGTGT CTGAATCTGG TATCGCAGCA GGTGTTCGTC GTATTGAAGC TGTTACGGGG
ACAGGTGCAC TTGATTTTAT AAATCAACAA ACCGCTTCTT TAACGACTAT TGCGGCACTG
GTTAAAAGCG ATGTAACTAA TGCGAGTAGC AAAGTGGAGC TACTTATTAG TCGTTCTAAG
CAGCTTGAAA AAGAAATTGG ACAACTTAAG CAAGAACTAG CAGCACAAGC AGGATCTGAT
TTAGTAAACA ACACCATTGA AATTAATGGT GTTAAGGTTC TCATTGCAGA TTTAGGTAGC
GTAGAAAGTA AAGCATTACG CGGCATGGTT GATGAACTTA AAAACAAAAT GCAGTCAGGC
GTTATTATGT TGGCTACAGC CAATGGTCCA AAAGTTGGCT TAATTGCTGG TGTTACTAAA
GATTTGGTAG GGCGAGTTAA AGCGGGTGAC CTTGTGAATA TGGTTGCGCA ACAAGTCGGT
GGTAAAGGTG GTGGTCGTCC TGATATGGCG CAAGCGGGCG GTAGTCAGCC TGAAAACATA
ACCTCAGCAC TAGAAAGCGT CTCAGCATGG TTAACAGAAA AACTGGCTTA A
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| Protein sequence | MIKSTAEVRQ AFLDFFATKQ HQIVKSSSLV PGNDATLLFT NAGMVPFKDV FLGAETRSYT
RATSAQRCVR AGGKHNDLEN VGYTARHHTF FEMMGNFSFG DYFKNDAISY AWEFLTGELG
LAKEKLLVTV YATDEEAFSY WRDEVGVPED KIIRIGDKSA NKKYESDNFW SMGDTGPCGP
CSEIFYDHGE DIFGGPPGSP DEDGDRFIEI WNIVFMQFNR QSDGRMDPLP NPSIDTGMGL
ERISAIMQNV HSNYEIDIFQ ALIKDTAALL DCSDLEHKSL RVIGDHIRSC SFLIVDGVVP
SNEGRGYVLR RIIRRAIRHG HKLEATGHFF HKLVASLIAQ MGEAYPELAQ QQAIIEKLLR
IEEEQFGRTL DRGMILLEDI LANLSGDIIK GDDVFKLYDT YGFPADLTAD IARERNLKID
KDGFDVAMKQ QRERAQQASQ FGTDYNQQLK SDQNTAFKGY DNDSYSATVV ELFNSQDQDP
VSQLNSGEQG IVILDHTPFY AESGGQVGDS GLLHLDGGVF EVTDTIKLGN AFAHRGTAHT
DVGLNRRVKA EINVERRAAI VKNHTATHLL HEALRKVLGE HVTQKGSLCD SDKLRFDFSH
FEGVTAQELH DVEQMVNNEI RRNHAKQTES MYIEEAKAKG AMALFGEKYD DEVRVVTLGD
FSIELCGGVH VNRTGDIGFL KIVSESGIAA GVRRIEAVTG TGALDFINQQ TASLTTIAAL
VKSDVTNASS KVELLISRSK QLEKEIGQLK QELAAQAGSD LVNNTIEING VKVLIADLGS
VESKALRGMV DELKNKMQSG VIMLATANGP KVGLIAGVTK DLVGRVKAGD LVNMVAQQVG
GKGGGRPDMA QAGGSQPENI TSALESVSAW LTEKLA
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