Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1038 |
Symbol | |
ID | 3519568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1064083 |
End bp | 1065381 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283503 |
Product | putative cytochromre c biogenesis protein |
Protein accession | YP_267787 |
Protein GI | 71277968 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.944461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTT TAGTAATAGG CCTTATATTT TTAATTTTAT TATTATTGAT TGTATGGCGA CCTTTCTTTA AACAGAAAAC ACAAGATGTT CGTGTCGATA GCAGTTTGCG TGATGAAACC AATATACGCC TATATCATGA GCACAAAAAA GAAATAGAAA AAGACTACGG CGAAGGAGGC ATTGATGAGG AAAACTATCA GTACCTGTTA GCTGAACTTG ATAATACCTT ATTGCAAGAT ATTGATACTA CTTCGACTGA AGACAAAGTT ACCACTACTG TAGTTAAGCC GTATTCTCCT CTTTGGCCAC TAGGGTTAAG TGTCTTTATT ATCATTTTCT CTGTGGCACT TTATAACAAG CAAGGCAGTT ATAAAATTCT TACTGAGTTA CCAGCAGGGC ATGGGCAGCA AGAAGCTAAA TCACAAGAAG AAATGCTAAA ACAGCGTGAA ACTGATGCTA TGGCACATAT TGAAAAACTG CAAAAACATA TTGAATCAAA CCCTGAAGAT AGTGAAGCCT GGTATAACCT AGGGCAAACT TATGTTGCAG TCGGCGGCTT CGATGAAGCA GTTATTGCAT TTAATCGGGT GATCAAAATT GAAGGGGAGC ATGCCGATAT TTTAGGTGCT ATTGCTCAAG CGCTTTATTA TAAAAATAAT CAACAAATCA GTGACCAAGT ACAAAAATAT ATTGATAAGG CATTAGCCCT TGATATAGAT GATCCATCAA CCAATATTTT ATTGGGCATG CATAACTTTA TTGGTGAAAA TTACCAACAA GCGGTAATCC ACTGGCAGCG TGTTATTGAT GCAAATAATC AAGGCGTCAA TATTACCGCA TTAAAAGAAG CGGTTGCAGA AGCTAATAAT CGACTCGGTG TCTCAGCAAG TAGCTCAGCA GAACAGTCAG TAAGTAGTTC TGCTGATAAC CCAGCAGATG CAGCAGGACC TCAATTAAAA GTGAGTGTCC GTTTATCAGA TGATATTGCT AAGCAATTAG CGCAAGGAGA AGATCGAGTA GTCTTTATAT ATGCGGTACC GACAAATGGT CAGCGTATGC CTCTTGCTGC GGTTAAGATG AAAGCTAGTG ATTTACCTAC TATCGTTGTG TTGAATAATA GTCAAGCGAT GAGCAGTGAA AACAACTTAA GTAGTGTAGA TAAAGTACAC GTATATGCCA TTGTCTCAAT GCAAGGTGGT GTAGGCATTA AATCAGGTGA CTATAAAGCT CAAGCGCTTG GTATCGATGT TAATCGCAGT GAAGCACTTG AATTAGTTGT GAATAAACTG GTTGAGTAA
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Protein sequence | MEFLVIGLIF LILLLLIVWR PFFKQKTQDV RVDSSLRDET NIRLYHEHKK EIEKDYGEGG IDEENYQYLL AELDNTLLQD IDTTSTEDKV TTTVVKPYSP LWPLGLSVFI IIFSVALYNK QGSYKILTEL PAGHGQQEAK SQEEMLKQRE TDAMAHIEKL QKHIESNPED SEAWYNLGQT YVAVGGFDEA VIAFNRVIKI EGEHADILGA IAQALYYKNN QQISDQVQKY IDKALALDID DPSTNILLGM HNFIGENYQQ AVIHWQRVID ANNQGVNITA LKEAVAEANN RLGVSASSSA EQSVSSSADN PADAAGPQLK VSVRLSDDIA KQLAQGEDRV VFIYAVPTNG QRMPLAAVKM KASDLPTIVV LNNSQAMSSE NNLSSVDKVH VYAIVSMQGG VGIKSGDYKA QALGIDVNRS EALELVVNKL VE
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