Gene CPS_1036 details

Gene Information

• Locus tag: CPS_1036
• Symbol: dsbE
• ID: 3518799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1062968
• End bp: 1063516
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637283501
• Product: thiol:disulfide interchange protein DsbE
• Protein accession: YP_267785
• Protein GI: 71278582
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0526] Thiol-disulfide isomerase and thioredoxins
• TIGRFAM ID: [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAGC TAATTCGCTT TTTACCTTTG ATATTAGTCA TCGCCTTAGG TGTTGTATTG 
TATCGTGGCT TATCACTTAA CCCACAGGAT ATGCCGTCGG CACTTGTTGG CAAGACTATG 
CCGGCTTTTG CTCTGCAAAC ACTTAATAAC AGTGAACAAA TGGTCACTCA AGCAGATCTT 
CTTGGTGATA TTGTTTTAGT TAATGTTTGG GCTACCTGGT GTCCTACGTG TAAGTATGAA 
CACCCGTATT TAGTTGATAT TGCAAAAGAC CCTCAAGTTA AATTGTATGG CTTGAACTAT 
AAAGATGAGC GTGTTGCCGC ACAGAAATGG CTGCAAAACT ATGAAGACCC TTATATGTTT 
TCAATTTTTG ATGAAGAAGG GACCTTAGGT TTAGATCTCG GTGTTTATGG TGCGCCAGAA 
ACGTTCGTTA TTGATCATCA TGGTATTATT CGTAAACGTT TTGCTGGTGC TATTGATACA 
CGCGTATGGC GACGTGAATT TGAGCCATTA ATTGCTCAGC TAATTGAAGA AAAAAAGCAG 
GGGAAATAA 

 

Protein sequence

MGKLIRFLPL ILVIALGVVL YRGLSLNPQD MPSALVGKTM PAFALQTLNN SEQMVTQADL 
LGDIVLVNVW ATWCPTCKYE HPYLVDIAKD PQVKLYGLNY KDERVAAQKW LQNYEDPYMF 
SIFDEEGTLG LDLGVYGAPE TFVIDHHGII RKRFAGAIDT RVWRREFEPL IAQLIEEKKQ 
GK