| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1034 |
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| Symbol | ccmA |
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| ID | 3519235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1059931 |
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| End bp | 1060590 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637283499 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_267783 |
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| Protein GI | 71279267 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.359278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTCCAAAA AAAACTCAAC TCCCTTGATC AGTGCAGTAA ACCTCACCTG TATTCGAGAA
GAACGCTTAT TATTTGATGA GTTGTCACTG CAAATAAATG CCGGTGACAT AGTGCAAGTT
GAGGGCCCTA ATGGCTCTGG AAAAACCAGT TTATTACGTA TTTTATCGGG TCTCTCTCAA
CCCTATGATG GTCAAATATT ATACAGAGAG CAACTCATAA GTCACTGTCG AGAAGAATTT
CATCAAAATT TACTTTATTT TGGCCATTTA TCTGGTGTAA AAGGTGAAAT GACCGCAGAA
GAAAATCTTG ATTTTAATTT GGCATTACAT GGTAACAAAA CCCAAGAGAG CTTATCTTAT
TTAGCAAAGG TAAACCTTTC AGGCTTTGAA GAGTGTTTGG CATCACATTT AAGTGCTGGC
CAGCATAGAC GTATCGCATT AGCGCGTTTA TATCAAAGTA ATGTGCCTAT TTGGATTTTA
GATGAACCCT TTACTGCCAT AGATAAACAA GGCGTTGCTA GTTTAGAGCG ACTGTTTTCT
TTACATGCTG AACGTGGTGG TTGTGTTATT TTAACCACAC ACCAAGATTT AATTAGCATA
AAGCCTGAAC AAATCAAAAA AATCACTCTA GATTACAGCT ATGATAGTGC TGTTGATTAA
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| Protein sequence | MSKKNSTPLI SAVNLTCIRE ERLLFDELSL QINAGDIVQV EGPNGSGKTS LLRILSGLSQ
PYDGQILYRE QLISHCREEF HQNLLYFGHL SGVKGEMTAE ENLDFNLALH GNKTQESLSY
LAKVNLSGFE ECLASHLSAG QHRRIALARL YQSNVPIWIL DEPFTAIDKQ GVASLERLFS
LHAERGGCVI LTTHQDLISI KPEQIKKITL DYSYDSAVD
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