| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1032 |
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| Symbol | ccmC |
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| ID | 3520112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 1058332 |
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| End bp | 1059078 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637283497 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_267781 |
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| Protein GI | 71279652 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.756263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAT GGTTACACCC TTATGCAAAC CCAGAAGTGT CTTATCACTT TACTAATAAG
TTATTACCTT GGTTAAGCGC CCTTGCGGCA ATCTTTCTCG GTATTGGCTT AGTATGGGCA
TTATTGTTCG CCCCTGCTGA TTATCAGCAA GGACATAGCT TTCGTATCTT CTACATTCAT
GTACCTGCAG CGTCATTATC TATGGGCATT TATTTTGCTA TGGCCGTCGC CGCCTTTAGC
AGCTTAGTAT GGCAATTAAA ACTTGCCGAT GCATCTGCAG CCGCTATGGC TCCTGTTGGC
GCAAGCTTCA CTGCCATCGC ACTAATTACT GGTGCTGCTT GGGGTAAACC AATGTGGGGT
ACTTGGTGGA TTTGGGATGC CCGTTTAACA TCAGAGCTCA TTTTACTGTT TTTGTACTTA
GGGGTAATTG CCTTACATAA CGCATTTGAA GATAAAAACT TAGCCGGTAA AGCTGCTGGA
ATTTTAACGC TTGTTGGCGT GATAAATATC CCAATTATTA AATACTCAGT TGACTGGTGG
AATACCTTGC ATCAGGGGTC TACGGTAAGC AAATTAGGTA AGCCGTCAAT GTCACTTGAT
ATGTTATGGC CATTCATCTT TTGTTTTATC GGCTTTTCAT TATTAGTCGG TGTGATCATT
TGTCTACGTT TTCGTAATGA AATTCTAGCG CGCAATAGCA TTCGTCCCTG GGTGCGTGAG
TTAGTGGAAA ACAACTCAAG TAGTTAA
|
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| Protein sequence | MWKWLHPYAN PEVSYHFTNK LLPWLSALAA IFLGIGLVWA LLFAPADYQQ GHSFRIFYIH
VPAASLSMGI YFAMAVAAFS SLVWQLKLAD ASAAAMAPVG ASFTAIALIT GAAWGKPMWG
TWWIWDARLT SELILLFLYL GVIALHNAFE DKNLAGKAAG ILTLVGVINI PIIKYSVDWW
NTLHQGSTVS KLGKPSMSLD MLWPFIFCFI GFSLLVGVII CLRFRNEILA RNSIRPWVRE
LVENNSSS
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