Gene CPS_1027 details

Gene Information

• Locus tag: CPS_1027
• Symbol: nagA
• ID: 3522000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 1054339
• End bp: 1055469
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637283492
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_267776
• Protein GI: 71281528
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.826575
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACAAA AACGCTTTCA TGCTCAACGA TTCTTTGATG GGCAAGCTTT TCTCGATGAT 
CAAGTATTGA CCATAGTCGA TGGTAAAATT ACTGCTATTG ACCAAGATAT TACTAATATT 
GATGTTAGTG TTACAGGTTT AGTTGTTCCA GGTTATATCG ACTTGCAAGT TAACGGTGGT 
GGCGGTGCAT TATTCAATGA TTCACCGTCA GTTGATAACT TAAAAACAAT CATGACTGCT 
CATGCTAGGT TTGGTACCAC AGCGATGATG CCGACCTTAA TTACCGATAA AATTGAAGTA 
ATGCAGCAAG CTGCAAAGGC CATTGCTCAA GCAATATCAG AAGGTGTTCC CGGTATCATT 
GGCATCCATT TTGAGGGACC GCACTTATCT ATTGATAAAA AAGGTACCCA TTGTGCCGAT 
TATATTCGAC CTATTTCTGA TGATGAATGG CAGGTTCTCT CTCGCCAAGA CATTGGCCAA 
ATTATGGTAA CGCTTGCACC GGAAACTGTA AGTGCTGAAG ACGTAACCCG AATGGTTGAG 
TTAGGAATTA AAGTTTGCTT AGGTCACACT AATGCTGATT TTAAAACGAC TCAACAGGCT 
ATTGATGCTG GGGCAAGTGG TTTTACTCAT TTATTTAATG CTATGTCCCC ATTGCAAGGT 
CGTGAACCGG GTGTTGTTGG CGCTGCGCTT TTAAATAATC ATACTAGCTG CGGTTTAATT 
GTTGATGGTT TCCATGTGGA TTACGCCAGT TGTAGATTAG CAATTCAAGC TAAACCTCAA 
GGTAAAATAT TCTTAGTAAC TGATGCAATG CCGCCCGTAG GCACAGATCA AACCCAATTC 
GCTTTATACG ATCGTACAGT TTATGTCGAT AACGGTAAAC TTACGTCAAC CACAGGTGAA 
CTCGCTGGCT CTTCTTTAGA TATGGCCAGT GCCGTGAAAA ATACGCATCA CAAGTTGGGC 
ATTGAGTTAG GCGAAGCAAT TCGGATGGCC AGTTTGTACC CAGCACAATA TTTATATCAA 
AACCAAACGG TTATGCGTGG TGAACTCATA CCAGGAAAAC AAGCTGATAT GGTGGTATTG 
AATGATGATT TGTCTGTACA AGAAACCTGG ATTGCAGGTG CAAAAGTTTA G 

 

Protein sequence

MTQKRFHAQR FFDGQAFLDD QVLTIVDGKI TAIDQDITNI DVSVTGLVVP GYIDLQVNGG 
GGALFNDSPS VDNLKTIMTA HARFGTTAMM PTLITDKIEV MQQAAKAIAQ AISEGVPGII 
GIHFEGPHLS IDKKGTHCAD YIRPISDDEW QVLSRQDIGQ IMVTLAPETV SAEDVTRMVE 
LGIKVCLGHT NADFKTTQQA IDAGASGFTH LFNAMSPLQG REPGVVGAAL LNNHTSCGLI 
VDGFHVDYAS CRLAIQAKPQ GKIFLVTDAM PPVGTDQTQF ALYDRTVYVD NGKLTSTTGE 
LAGSSLDMAS AVKNTHHKLG IELGEAIRMA SLYPAQYLYQ NQTVMRGELI PGKQADMVVL 
NDDLSVQETW IAGAKV