| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1025 |
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| Symbol | |
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| ID | 3519437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1050261 |
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| End bp | 1052900 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283490 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_267774 |
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| Protein GI | 71279079 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TAAAGTGGGC GTTTACAATT GCCGCTAGTT TATCTTTACT CGGTTGTGAA
AAATATCCTG AGCCAGCAGT TGATACGGGG GAGAAAATCA ACCTACAGGC AATTTACTCC
GTTACCCAGA GTGATATAGA TAACATAGCC CAGAATTTAG AGGTTAATTA TCGAGTGGTT
ACCAATATTC CTACGGATAA ATGTGACAGT AAAATTGCTG ATGGTGCATG CTTTGAAGTG
GAGTTAAGTT TTACTGCGAA GAAAGCAATT GCAGCTAAAG ATTGGACTAT TCATTTTAGC
CAAATCTCAC CTATCCAGTC TTTTGAAAGT GAAGATTTCA CCGTAAAACA CCTAAACGGT
GACTTACATG TTATTGCTTT ACAGGACAAA TTTTCTGGAT TTTCTGCAGC AGAAACTAAA
AAAATAACGT TTCGTGCTAT GTTTTGGTCA CTGAGTGAGA CTGACGCTTT ACCTAACTAT
ATTGTCAGTG CACCTGGTTT AGATGCTCGT GTTATTGAAA GTACAGTACC CTATATTGAT
AAAGATACGG GACTAGAAAT ATTACCCTAT GTTGAACCTT TTACTGATGA AAAAACGCAA
TTTAAGCGCA CAGCCTCAGA TAAGACTCAA TGGTTAACTA GTGAAAAACT TTATCAACGT
AATTCTGTAC TGGTAGAAGA TAAGTTAGCA GTTATTCAAG CAATTATTCC AACACCTAAA
TCAGTCACTC TCGATGCCAA TGATGGCTTT GCAGATATAA GTAAAGGCAT TGCAATCTCT
CTTGGCAATG TAAAACACCA TGATGTGGAT GCAGCGATAT CGCGTTTAGA CACCTTGGGT
GTTAAACAGA ACTCTGTCGG TTTGCCACTG CATTTAAGTA TTGTGAGTAA TAACGATAAA
GTTATTGGCA GTTATAGTTT AACGGTAACT GAGAAAGAAA TTAGCATAGT GGGTGTCGAT
GGTAATGGTG TCTTCAATGG CTTGCAATCA CTAGCAAGCT TAGTGACGGT TGGTGAATCG
CGTCTACCTA TGATAGTGGT TGATGATGAA CCACACTTTA CCTTTCGTGG CATGTTAGTT
GATGTTGCTA GAAATTTTCA TTCTAAAGAG TTTATTCTAA AACTACTTGA CCAAATGGCG
GCATACAAAT TAAACAAACT ACATTTGCAC CTTGGTGATG ATGAAGGTTG GCGCTTGGAG
ATCCCAAGCT TGCCTGAATT AACTAATATT GGCGCAAAAC GTTGTTTTGA TGTGGCAGAA
GAAAACTGTT TGATCTCGCA GTTAGGCGCA GGTGTTGATG AAAACTCATC AGTAAGCGGC
TATTACAGCG TAAGTGACTA TCATGAAATT TTACAAGCGG CCACTGCACG TCATATTCAA
GTGATCCCAT CACTTGATAT GCCAGGTCAC TCTCGTGCCT CGATTAAAGC GATGACGGCC
CGTTACAAAA AATTCATGGC CTTAGAAGAT GAAGCAAAAG CTAAACAGTT CTTACTCGAG
GATTTTGAAG ATAACACTCA GTATTCCTCA GTACAATTTT ACAGTGATAA CACTATTAAT
GCCTGCTTAG AGTCTTCTTA TGACTTTGTT ATTGAAGTGA TGACTCAGGT GAAGAAAATC
CATGCCGATG CTGGCCAACC ACTAACTCGC TATCATATAG GCGCAGATGA AACAGCGGGT
GCTTGGTTAG AATCACCAGC TTGTAAAGCG TTTGTCGCTA ATAATGATCA GGGTGTTACA
GAAATGGGTG AGCTTGGCGC TTATTTCATT GAACGTGTGG CCGGAATATT ATCTGATCTG
GATATTGAAA CTGCGGGTTG GAGCGATGGT ATGGAGCACA CTCGTGTAGA TAATATGCCC
GCTATAGTTC AAGCCAATGC TTGGGATACG CTAGCTTGGG GAGGCCACGA AAAGGTTCAC
CGATTGGCAA ACAGAGATTG GCAAGTCGTT ATTTCTAGCC CAGATGTTTT ATATTTCGAT
TTTCCACATG AAGCAGATCC AAAAGAACAC GGTTATTACT GGGCATCACG TCATACTAAT
ACAGAAAAAG TCTTTCAATT TATGCCTGAT AATTTACCCG TTCATGCTGA ATTTTGGTTA
GACAGAGAAG ATAACGCCTA TGTTGCCGAT GATACAAAAG CAGCCCTAGC ACCGGGGAAA
AAATTTCTAG GTATTCAGGG ACAGTTATGG AGTGAAAATG TTCGTACTGA TGATATGGTT
GAACATAAAG TTTTTCCACG TTTATTAGCT CTTGCAGAAC GTGCATGGCA TCTTGCTGAT
TGGGCTGTAC CTTATAATTA CCAAGGTGCA AAATATTCTC AACAGAGTAA TAGCTTCTCC
GACAAGTCAA AAGCCATGCG TGATAGCCAA TGGGCGTTAT TTGCAAATAC TTTAGGACAA
AAGGAGTTTA CTAAACTTGA GTTAGCACAA ATTGATTACC GTTTACCTAC CGTAGGTGCG
ATTATCCAAG CGGGTAAGTT GCACGCCAAT ATTGCTTTTC CAGGTCTTGC CATAGAATAT
CGAGTGAATG GTGGAAACTG GCTTACTTAT CAAAATCCTA CTGCTGTTTC AGGTGAAGTA
AGTATTAGGA GTCGAAGTAC TAATGGCTTA AGAACAAGCC GTATTACGAA AATAAAGTAA
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| Protein sequence | MNKIKWAFTI AASLSLLGCE KYPEPAVDTG EKINLQAIYS VTQSDIDNIA QNLEVNYRVV
TNIPTDKCDS KIADGACFEV ELSFTAKKAI AAKDWTIHFS QISPIQSFES EDFTVKHLNG
DLHVIALQDK FSGFSAAETK KITFRAMFWS LSETDALPNY IVSAPGLDAR VIESTVPYID
KDTGLEILPY VEPFTDEKTQ FKRTASDKTQ WLTSEKLYQR NSVLVEDKLA VIQAIIPTPK
SVTLDANDGF ADISKGIAIS LGNVKHHDVD AAISRLDTLG VKQNSVGLPL HLSIVSNNDK
VIGSYSLTVT EKEISIVGVD GNGVFNGLQS LASLVTVGES RLPMIVVDDE PHFTFRGMLV
DVARNFHSKE FILKLLDQMA AYKLNKLHLH LGDDEGWRLE IPSLPELTNI GAKRCFDVAE
ENCLISQLGA GVDENSSVSG YYSVSDYHEI LQAATARHIQ VIPSLDMPGH SRASIKAMTA
RYKKFMALED EAKAKQFLLE DFEDNTQYSS VQFYSDNTIN ACLESSYDFV IEVMTQVKKI
HADAGQPLTR YHIGADETAG AWLESPACKA FVANNDQGVT EMGELGAYFI ERVAGILSDL
DIETAGWSDG MEHTRVDNMP AIVQANAWDT LAWGGHEKVH RLANRDWQVV ISSPDVLYFD
FPHEADPKEH GYYWASRHTN TEKVFQFMPD NLPVHAEFWL DREDNAYVAD DTKAALAPGK
KFLGIQGQLW SENVRTDDMV EHKVFPRLLA LAERAWHLAD WAVPYNYQGA KYSQQSNSFS
DKSKAMRDSQ WALFANTLGQ KEFTKLELAQ IDYRLPTVGA IIQAGKLHAN IAFPGLAIEY
RVNGGNWLTY QNPTAVSGEV SIRSRSTNGL RTSRITKIK
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