| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1021 |
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| Symbol | |
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| ID | 3522046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 1043267 |
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| End bp | 1045804 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283486 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_267770 |
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| Protein GI | 71281574 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACTA AAACATTTAA AAAAGGCGTG TTAGCGAGCT CAATAGCAAT GATCCTAGCT
GGTGTAACAT CACAAGCTAT GGCAGCCGAA GAAGCCGCTT CTGAAATAAA CAAAGACCAA
GTTGAGGTAA TTCAAGTTAC TGGTATTCGT GGTAGCTTAA AAAAAGCGTT AAACAACAAA
CGTTTTTCTG ATGCTGTTGT TGATTCTATT TCAGCTGAAG ATATTGGTAA ATTTCCAGAC
CGAAATATTG CTGAATCTTT ACAACGTATT CCAGGTGTCA CTATTGCTAG AAATTTTGCC
GGTGAAGGTG GCAACGTCTC TATCCGTGGT ACAAACCCAG AATTAACTTT GGTTACTATG
AATGGTAATT ACTTGGCTTC TACTGGTTGG TTTTCTCAAC AACCAGCTAG TCGTTCATTT
GACATGGACT TACTTCCACC TGAATTAGTT GCTGGTGTTG ATGTTTATAA ATCCCCTATG
GCTTCCTTAG ATGAAGGTGG TGTTGGTGGC ACCGTTGCTG TACGTACAAG AAAGCCGTTA
GAGCTTGATG CGAACACTTT ATACCTTTCT GCTGAAATTC AAGATAACAG TATTTCTGAT
GATAATGGCC AAGGGGCGAC TGGTTTCTAT AGCTGGAAAA ATGATAGCGA AACTTTTGGT
TTATTAGGTA GTATCTCAAC ATTAGAAAGT GTGGGTCGTG CTCATAAAGC TGAAAACTAT
ATGGATGACG GTTGGGCTGG AGCAGGTATT GCTGAATTTA AGCAAGACCG AAAACGTACT
GCTTATGACT TAACTTTACA ATATGCACCA ACAGATAGTT TATCAATGAA CCTGCATTAT
TTAACTATTG ATTTAGATGC TGCTAATACT AACCAAAACT ATTTAATTAT TGCAGGCACA
GACAGTGCTG CATTTAATGC AAATGTAACT GGCGCTACGA AATTTGGCCC AGAAAATGGT
TTTGCGTTAA ATGGTAAGTA TGCTGGCGCT GCCTTTGATG ACACCAACTC TCGAAATGCT
GAGACAGATA CTGGTGTTAT TGCTTATGAA GTTGATTATT CAGGTGATGG GTATTCAATA
AATGCTAAAG TTGGTAATAC CAATGCAACA GGTGGCGATG GCGGAAACTA TAATGTAGGT
TGGGCATCTA CTAATGCTAA CCAAAGTATT GATTTTGATA TGTCAGGTCA TGACAGTATG
TTGTTAAGCC CAAACAATGC AGATGCAAGT AATCATGCTG AATACGCAAT GACTAATGCC
TCTGTTAATG CTGCTGGGTA CCGTGAAGAT GATGAAACCT TTGCACAAGT TGATATTAAT
TTTGATGTCG AGTTAGGCCC TGTTTCAAAT ATCAAAACAG GCGCTAAATT AAGGGATCAT
GAATTTACTA GTTATTCTAA TAAATGGACA TTTGAAGATG GTTTTACTGA CGGCTTAACA
AAAGCTGATT TTGCTGATGG TACTTTTAAC CACTCGGGTG TTGGTTTGAG TGGGGATAGC
CCAACAGCTA TTGCCCGTGT TGACGGCAAT AAAATACGTA CCTATATGGA TAGCGTAAAA
ACGGGTGAAA CATTAAATAA AGATAGCTTT GGCGTTATCA AAGAAGATAT TTTTGCTGCT
TATGTACAAG GTGACTTTAG TGGTGACGAC TATAGAGGTA ACATTGGCAT ACGTTATGTT
AAAACTGACA CCTCTGCAGA TTACTTCTTA GGGAATGATC CAGCAGAAGA AGAGAGTGAT
TACTCTGATT GGTTACCTAG CTTTAACTTA GCACTTGATT TAGATAGTGA TTTAATACTT
CGTATATCTG CCGCTAAAGT AATGAGTCGT CCTAATTATT CGTTCTTAAA CCCTGCTGCA
AGTGTTAATG AAACGACTAA ACGCATCACT AAAGGTAGTA TTAAACTTGA GCCATACCGT
GCAAACCAAT ATGACATTGG TTTAGAGTGG TACTTCAACG AAGAATCTTT ACTTTCAGCT
ACATTGTTTA GTAAAGATAT TAGTTCTTTT ATTATTCCTG GTGCTAACGA AGAAAAAATT
CAGTACAAAG GTGAAGAGTA TATTTTAAGT ACACCAGGCC AGGGTCTTGG CGGTCAACTT
GAAGGTGTTG AATTACAGTA TCAACAACAA ATGGGTGAAT TTGGTTGGTC TGCTAACTTA
ACTTATACTG ATGGTTATGG TTTACAAGAT AACGGTTCAG AAATTGTTAA GGCGCCTTTA
GCTGGTATGT CTAAAATAAG TTATAACGTA AGTGCATTTT ACGAAACTGA CTTAGTGTCT
ACACGCCTTG CTTATACGTA TCGTGATGAG TTTATTGCTC AATCAACAGG TATTGGTGGT
AACACAGGTT GGGATGCCCA TGGTTTCTTA GATGCTAACG TTACTTGGCA TGCAACAGAA
GGTCTGGATG TAAGTCTGGA AGCAACAAAC ATCCTTGAAG AAACAACCAC TCAACGTTTT
GTTAGTGAGT TTGATGCAAT GCGTTTAGCT GCTGATAATG GTCGTAACAT TTATCTTAAA
GTATCTTATC GTTTATAA
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| Protein sequence | MSTKTFKKGV LASSIAMILA GVTSQAMAAE EAASEINKDQ VEVIQVTGIR GSLKKALNNK
RFSDAVVDSI SAEDIGKFPD RNIAESLQRI PGVTIARNFA GEGGNVSIRG TNPELTLVTM
NGNYLASTGW FSQQPASRSF DMDLLPPELV AGVDVYKSPM ASLDEGGVGG TVAVRTRKPL
ELDANTLYLS AEIQDNSISD DNGQGATGFY SWKNDSETFG LLGSISTLES VGRAHKAENY
MDDGWAGAGI AEFKQDRKRT AYDLTLQYAP TDSLSMNLHY LTIDLDAANT NQNYLIIAGT
DSAAFNANVT GATKFGPENG FALNGKYAGA AFDDTNSRNA ETDTGVIAYE VDYSGDGYSI
NAKVGNTNAT GGDGGNYNVG WASTNANQSI DFDMSGHDSM LLSPNNADAS NHAEYAMTNA
SVNAAGYRED DETFAQVDIN FDVELGPVSN IKTGAKLRDH EFTSYSNKWT FEDGFTDGLT
KADFADGTFN HSGVGLSGDS PTAIARVDGN KIRTYMDSVK TGETLNKDSF GVIKEDIFAA
YVQGDFSGDD YRGNIGIRYV KTDTSADYFL GNDPAEEESD YSDWLPSFNL ALDLDSDLIL
RISAAKVMSR PNYSFLNPAA SVNETTKRIT KGSIKLEPYR ANQYDIGLEW YFNEESLLSA
TLFSKDISSF IIPGANEEKI QYKGEEYILS TPGQGLGGQL EGVELQYQQQ MGEFGWSANL
TYTDGYGLQD NGSEIVKAPL AGMSKISYNV SAFYETDLVS TRLAYTYRDE FIAQSTGIGG
NTGWDAHGFL DANVTWHATE GLDVSLEATN ILEETTTQRF VSEFDAMRLA ADNGRNIYLK
VSYRL
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