| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1016 |
|---|
| Symbol | plsC |
|---|
| ID | 3521222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1037922 |
|---|
| End bp | 1038650 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637283481 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_267765 |
|---|
| Protein GI | 71280753 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.602503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCTG TAATACGCGT TTTTTTAATG ACCTTGGCGT TGTTCATCAT TTGCACTGTC
TCTATTTTCT ATTGTTTGTT GCGTCCTTTT CACCGTGATA ATGTTTATCA TACTTCAGTA
TTTCTTGGAA AAATCACTAA AATATTTGGT GTTGACGTCG AACTGAGAAT TCCTGCATCA
CTTAAAGATA TTGGACCTGT GGTTTGGATG GCAAATCATC AGAACAGCTA TGATCTTTTT
ACTCATGCTA ACGCAGTTCA GCCTGGTACC GTGAGCGTAG GCAAAAAAAG CTTAAAATGG
ATTCCTATTT TTGGACAAAT GTATTGGTTA ACGGGCAATA TTTTAATTGA TCGAAAAAAC
ACCAGTAAGG CAATGAATAC AATTGAATTA ACGGCTGATA AAATAAAGAA AAATAAGCTT
TCTGTCTGGA TGTTTCCTGA AGGTACCCGT AGCCGAGGAA GGGGTCTATT GCCATTGAAA
ACAGGGGCTT TTCGCACAGC TCTTCAGGCA GGAGTGCCAA TTGTACCCAT ATGTGCCAGT
AATCAGGTAG GTACAATTGA CTTAAACCGC TGGGATAATG GAAAAATCAT CATAGAATTC
CTAGATCCTA TTCACCTTGA TGATGCAAGT CGCGAAAACT TACGCTCAAG AGTAAATGAA
GTCCATAATT TAATGTCCAA TAAAATAGAA CAGTTATCAA TTGAAGCCGC GGCTTATCAT
AATAAATAA
|
|---|
| Protein sequence | MLAVIRVFLM TLALFIICTV SIFYCLLRPF HRDNVYHTSV FLGKITKIFG VDVELRIPAS
LKDIGPVVWM ANHQNSYDLF THANAVQPGT VSVGKKSLKW IPIFGQMYWL TGNILIDRKN
TSKAMNTIEL TADKIKKNKL SVWMFPEGTR SRGRGLLPLK TGAFRTALQA GVPIVPICAS
NQVGTIDLNR WDNGKIIIEF LDPIHLDDAS RENLRSRVNE VHNLMSNKIE QLSIEAAAYH
NK
|
|---|
| |