Gene CPS_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0987 
Symbol 
ID3519481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp1001107 
End bp1001694 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content39% 
IMG OID637283452 
ProductTetR family transcriptional regulator 
Protein accessionYP_267736 
Protein GI71278172 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.995143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAA CTATAAACCA GCCTAAAAAT AAAAAGCAGC AGCTTTTAGA TACCGCCTTA 
GCCTTGTTTG TAAATCAAGG TATTTATGCA ACGTCCACCG CATCTATTGC CAAAACAGCA 
GGTGTTGCCA CTGGCACTCT TTTTCATCAT TTCCCTTCAA AAGATGCTTT AGTTCTTGAA 
CTTTATAAAA ATATAAAACA AGAATTTGCA CTGCAAATAG CACCATTCGA ACTCGATGCA 
ACCCAGTTAG AACAACAAGC CAAAGTGATT TGGCAACAAG CAATTGATTG GGCTTTAGCT 
AATGCTGAGC AACAGCAATT TTGCTTACTT GTGATGCAAT ACCAACCGCT TTCGGCCAAT 
ACTAAAGCTC AAATATTTGC TGATGAGTTT GGTTTTCTAA AGGAGATAAT GCTCTTTGGT 
CAACAGCATC AACTTATTGC TAATTATCCG ATAGAGCTGA TGTTAGAAAG TGCCCATGGT 
CAGTTCCTTA CTAGTAGTCA GTTTTTCATT AACAACACTG AGCTCGCTCA AGATGCTAAA 
TACCGCGAGG CGGCATTTAA TCTATTCTGG CAGTCATTCA CACGTTAA
 
Protein sequence
MSVTINQPKN KKQQLLDTAL ALFVNQGIYA TSTASIAKTA GVATGTLFHH FPSKDALVLE 
LYKNIKQEFA LQIAPFELDA TQLEQQAKVI WQQAIDWALA NAEQQQFCLL VMQYQPLSAN 
TKAQIFADEF GFLKEIMLFG QQHQLIANYP IELMLESAHG QFLTSSQFFI NNTELAQDAK 
YREAAFNLFW QSFTR