| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0986 |
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| Symbol | |
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| ID | 3521172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 998514 |
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| End bp | 1000694 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283451 |
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| Product | major facilitator family transporter |
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| Protein accession | YP_267735 |
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| Protein GI | 71280703 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.776393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAACGA CCCTCAAACC TTTTATCCTA TTACTAACAA GTGGCTTTTT GTTAATGTTA
GGTTATGGAT TAAGCAACAT TTTACTACCT GTGCGTATGC AGAGCGATGG GGTGAGCCTG
GATAATATGG GCTTAGTACT GTCTATGTTG TCTGTGGGTT TTTTGCTGGG TGCATATTAT
AGCCGTATCT TATTACAACG TGCTGGTCAT ATAAGAATAT TTGCCATGTG CGGTAGTTTA
ACCTCTGTGG CGATTTTACT TTCAGGCCTT TACCCCGAGC CTTTAATACT CGCGGGGATG
AGGATAGTTA CGGGGTTTTG TATTGCTTGC ACCAATGCCA CTCTTGATAG TTGGTTAAGT
CATAGCGCCA CTGAAAAAAA TAGGGGACGT ATACTCTCCA TTAATCAGAT GATGATAATG
ACAGCCCTAT TTTCTGGCCA ATTTTTATTA AATGTCGCGC CGATTAATGA TATTACCCTG
TTTGTTATCT GTGGCATTTT ATTTAGTTTA TCCATTACAC CCATCGTTAT TAGCAGACAA
CAAGGTCCAC AAATTGAAGA TAGCCCATCA ATGTCTTTAA TAACTGTGTT CAAACTGTCT
CCTTTGGGTG TGGTAAGTAG TTTTTATTGT GGCATTTTGT ATGCTGGTTT AATGAATATG
TTGCCTATTT TTGCCAGTAA CAACGGTATT ACAGATTTAG ATTTATCCAT ATTTATGGGA
TCAGCAATCT CTGGGGCAAT TATTTTACAG TTCCCTATTG CCTATTTATC GGATAACTTT
GACCGCCGAA AAGTCATGCT ATTTATGGTA GCGACACTCA TTGTACTGTG CTTATCTGTG
CCATTACTTA TGTCCGAAGA TATGTTCAAA CTAACCTTAT TTGCTATTGC GCTAATCACT
GGTTTGGTTG CCTGTCTTTA CCCAATGAGT ATGTCTGAAA CATTTGATAC CGTCTTAAAA
GAACAAATTT TGGCAGCAAT GAGTTCGCTA TTATTAATCT ATGCCTTAGG CAGTATTTTA
GGTCCTTACC TTGCTTCTGT AGTGATGAAT TCCTTCGGTA GCAGCGCGCT GTTTAGCTTT
ATGAATGTAG TCGCCTTAAC TCTGTTACTT TTTATCGGTA TTCGTATGAA GCTACAGCAA
GCTTTACCAC TTGATGAGCA AGAAAGCTTT ATCATGCAAA CACCCAGTGG CGTAGTATCA
GAGCTCGATC CTCGTACACA ATATGCAGAA GCACAATTCG AATCAACTCC GGAAGTGGAA
GTTGCTATTA GCTTGGCGAA TAAAAACCCA TCGGCTGCGG TTAATATGGT TAAAGCAATT
GTGCAAAGAG ATCCAAAAAA TGCGTCAAAC TTAGCCGCGG CATTAAGTAC TATAGAGGCG
ATAGACATTG GGAAATTATA TGCCGCAATA ACATCAGCAG CTCCACAAAT GAGCATTCAC
ATTGCTGAAG CATTAACCAA TGCATCCCCT GAACAAGCGG ATCAACTTGT TGATTGGATC
ACCTCTGAGT ATCCCGATCA ATTTACTAAC ATTGTTGTCG CAATTGCTAA TGCAATGCCT
GATAACGGTA TTGATTTAAT GGAATTAGCC GCTGAGAACA TGGCCGAAGA ATACCCTAGT
GAGTTGCTAG AAATGACTGA AGAATATATG ACAAACCTAT CGGATTCTTT AGATGCAATG
CGTCCAGTCG ATAGGGTCGC TGCGGCCTGT GAAAATACGG CAACAGAGCT TTACAATCGT
TTATCCGATG TATCTCCTGA ACAGTCTGCA GAGCTTGCCT TCACGGTATC AGAATCTCTG
CCTGAGTCGT CAAACGATGT TGCTGAAGCC TATGTTCAAA ACTTAATTGA TAGTGAAAGC
GAAGGCGAAA ATGAAAATAC CAATGAAAAC GAGCAAGTTT TCTCAGAAGA TGCATTAGAA
AATATCGAGA ATGCAGCTAA TAACTATATT AATCATATGG TTGACAACAT CCCTGAGCAT
GCAGTAGATG TCGCGAGTAC ATTCGTTGAT TCTTTTCCCG AAGTTGCTTC GGATATGCTC
GAAATACTGC AAGACTCGGA TGACATCGAA GACAGCGAGT TAAGTATTTC TATTGATGAT
AAGCCGTTAC AGAGTATTGT AGAGCAGCAA TTACAAGAAG CCGTACAGAC TCAGTCTGAT
GATATTGAAC AAAAAAATTA A
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| Protein sequence | MITTLKPFIL LLTSGFLLML GYGLSNILLP VRMQSDGVSL DNMGLVLSML SVGFLLGAYY
SRILLQRAGH IRIFAMCGSL TSVAILLSGL YPEPLILAGM RIVTGFCIAC TNATLDSWLS
HSATEKNRGR ILSINQMMIM TALFSGQFLL NVAPINDITL FVICGILFSL SITPIVISRQ
QGPQIEDSPS MSLITVFKLS PLGVVSSFYC GILYAGLMNM LPIFASNNGI TDLDLSIFMG
SAISGAIILQ FPIAYLSDNF DRRKVMLFMV ATLIVLCLSV PLLMSEDMFK LTLFAIALIT
GLVACLYPMS MSETFDTVLK EQILAAMSSL LLIYALGSIL GPYLASVVMN SFGSSALFSF
MNVVALTLLL FIGIRMKLQQ ALPLDEQESF IMQTPSGVVS ELDPRTQYAE AQFESTPEVE
VAISLANKNP SAAVNMVKAI VQRDPKNASN LAAALSTIEA IDIGKLYAAI TSAAPQMSIH
IAEALTNASP EQADQLVDWI TSEYPDQFTN IVVAIANAMP DNGIDLMELA AENMAEEYPS
ELLEMTEEYM TNLSDSLDAM RPVDRVAAAC ENTATELYNR LSDVSPEQSA ELAFTVSESL
PESSNDVAEA YVQNLIDSES EGENENTNEN EQVFSEDALE NIENAANNYI NHMVDNIPEH
AVDVASTFVD SFPEVASDML EILQDSDDIE DSELSISIDD KPLQSIVEQQ LQEAVQTQSD
DIEQKN
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