| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0984 |
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| Symbol | |
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| ID | 3521330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 994838 |
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| End bp | 996454 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283449 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_267733 |
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| Protein GI | 71280861 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTGGC GTGGCGCGGT AATTTATCAA ATTTATCCAC GTAGCTTCTA TGATGCTAAT
CAGGACGGTA TTGGCGATTT GCCAGGAATC ATTAGCAAGT TAGACTATAT TGCTAGTTTA
GGGGTTGATG CTATTTGGAT CTCTCCTTTT TTCAAATCCC CAATGAAAGA CTTTGGCTAT
GATATTAGCG ACTATCGTGA AATAGACCCT ATTTTTGGTA CGCTGGCTGA CTTTGATGAA
CTTGTCATTA AAGCACATGC CCTTGGCATT AAAATTATGA TTGATCAGGT GCTTAGTCAT
ACCTCGGATC AGCATCAATG GTTTATTGAC TCACGTGAAG ATCAAACTAA TGATAAAGCG
GATTGGTATG TCTGGAGTGA TGCCAAAGAA GATGGCACTG CGCCTAACAA TTGGTTATCT
ATATTTGGCG GAACAGGTTG GACTTGGGAG CCAAGACGTC AACAATATTA CCTACATAAC
TTTTTAACCA GTCAGCCAGA TTTAAACTTT CATAATCCTG ATGTACGCCA AGCGGTATTA
GACAATATTG AATTTTGGCT TAAACGTGGT GTTGATGGTT TCCGCCTTGA TGCGATTAAC
TTTTGTTATC ATGATGCGCA ATTACGTGAT AATCCCGCGA AAGCTAAAGA GTTAAGAACA
AGCATCGGCT TTGATGAGAA AAACCCATAC GCTTATCAGT ATCATTATTA CAATAACACC
CAAGATGAAA ACTTAGGTTT TATGGAAGAT ATTCGAACAC TGCTAAACGA GTACCCAGGT
ACGGTGGCTT TAGGTGAAAT ATCTTCAGAA GATTCCTTAA AAACTATGGC TGAATATACC
CAAGGCGAAC ACCGCTTGCA TATGGGCTAT AGCTTTGATT TATTAACGGA TAATTTTAGT
GCGAGTTATA TTAAACAGGT TGTACAAAAC CTTGAATCGC GTGTATTAGA TGGCTGGCCA
TGTTGGTCTA TTTCAAACCA TGATGTAGAG CGTGTTGTTA CTAGGTGGGG CGGTTTTAAT
AGTAAAGATT TTGCTAAAAT GCTCTATGCA ATGATTTCGT CATTACGTGG CAGCGTTTGT
AGTTATCAAG GTGAAGAGTT AGGTTTAAAT GAAGCCGATA TTGCCTTTGA AGATATTCAA
GACCCTTATG GCATCACTTT TTGGCCTCAA TTTAAAGGCA GAGATGGTTG CAGAACGCCA
CATCCTTGGC AGCATAATGC AATTAATGCT GGCTTTAGTG AAGGCAAACC CTGGTTACCG
GTATCCAATG AACACTTTGC TAAATCAGTC GATGTGCAAG ATGATGCGGT CGATTCTGTG
CTTAATAGCT ACCGTAATTT TAACCGCTGG CGCAAAGATC AACCAGCGTT ACGTTACGGT
GACATCAATT TTATTGATAC TGCAGAACCA CTACTAGCTT TTGTTCGTCA ATACCAAGGT
GAGCAGTTAT TAGTATGCTT TAACTTTAGT GAGCAAAGCC AAATAGTAGC TTTATCTTCA
CTGACTCCAG CAAGTGATAG CCTAACTGTG TTGTCTGATC ATAAGCTAAT AAGCGCAACA
ATTACTGATG GTGTATTAGA ACTACCACCT TTTGGCTGTT TTTATAGCAA GCTTTAA
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| Protein sequence | MWWRGAVIYQ IYPRSFYDAN QDGIGDLPGI ISKLDYIASL GVDAIWISPF FKSPMKDFGY
DISDYREIDP IFGTLADFDE LVIKAHALGI KIMIDQVLSH TSDQHQWFID SREDQTNDKA
DWYVWSDAKE DGTAPNNWLS IFGGTGWTWE PRRQQYYLHN FLTSQPDLNF HNPDVRQAVL
DNIEFWLKRG VDGFRLDAIN FCYHDAQLRD NPAKAKELRT SIGFDEKNPY AYQYHYYNNT
QDENLGFMED IRTLLNEYPG TVALGEISSE DSLKTMAEYT QGEHRLHMGY SFDLLTDNFS
ASYIKQVVQN LESRVLDGWP CWSISNHDVE RVVTRWGGFN SKDFAKMLYA MISSLRGSVC
SYQGEELGLN EADIAFEDIQ DPYGITFWPQ FKGRDGCRTP HPWQHNAINA GFSEGKPWLP
VSNEHFAKSV DVQDDAVDSV LNSYRNFNRW RKDQPALRYG DINFIDTAEP LLAFVRQYQG
EQLLVCFNFS EQSQIVALSS LTPASDSLTV LSDHKLISAT ITDGVLELPP FGCFYSKL
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