Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0983 |
Symbol | |
ID | 3521761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 992036 |
End bp | 994546 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283448 |
Product | glycosy hydrolase family protein |
Protein accession | YP_267732 |
Protein GI | 71281290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTTCAT TCACATTGAA ATACTTCACC ATTAATTCAT TAACTTGTTT ACTCACTGGC TTATTAACTT GCTTGGTTAT ATCAACGCCA TCATTGGCAA GTTCGGGGAA TTACCTTAAT CATAAATTAG CAGGTGATAG CCTTGTTATC ACCACTAACT CAGTAGAAGT AACTTTGAGT GCTTATGGTG AAGGCGCAAT AGCAGCACAT TACCAAAACC TTGAGAAAAA GCTGCCAGCT AGCCAACTGC CCTCCTTTGC CATCAAAGAA AATGCACATA ACAGTAAGTT TGTTATAACA GAAGATAAGA ATCAGCTGAC ATTAACCTTA AATAAGCTAA GTGCGGTGAT CAACAAAGCG CCCTTTTCTA TTAGTTATTA CCAGAAAAAT AAGCACCAGA AAGACACATT ACTTATCTCT GAGCAGAAGG GTTTCTTTAG CGATACCGTT CTTGAAGAAA ATAAAAGCTT AGCTGTTCAA GGATTTCGCT TTCACCTAAC TGACACTGAA AAACTACTTG GCGGTGGTGA ACGAGTGCTT GGTATGGATA GACGCGGTCA TAGTTTCCCT TTATATAATC GAGCACATTA CGGCTATACC ACACAATCAG AGCAAATGAA TTTCTCAATA CCCGCAGTAA TGTCGAGTAA TAAATATATT GTGCTATTTG ATAACTCCGC CAAGGGTTAT ATGGATCTAG CGAAAAAAGA AAAGAATACC CTTGAGTTTT CTGCCGTTGC AGGTCGAATG GCTTATATTG TATTTTCTGC TGATTCTTAC CCTAAACTGC TCAATAACTA TGTTGATGTT ACCGGTAAAC AACCGCTACC TCCGCGTTGG TCTTTAGGTA ACTATGCTTC ACGTTTTGGT TATCGCTCAG AAGCCCAAGT AAGAGCAACA GTAAATAAAT TTATCGATTT AGATTTTCCT CTTGATGCCT TAATTCTAGA TTTATATTGG TTTGGTAAAG ACATTAAAGG CCATATGGGT AATTTAGCTT GGGATAAAGA AGCCTTCCCT GAACCTGAAA AAATGATAAG TGATATTAAA GAGCAAGGCG TAAACACTAT CTTGATCACT GAACCCTTTG TACTGAGTAC TTCAGCTAAG TGGCAAGATG CTGTTGAACA GCAAGCATTA GCCAAAGATG CACAGGGCAA CGCTAAACAG TTTGATTTTT ATTTTGGTAA TACCGGTTTA GTTGATGTCT TCAATGACAA AGGACAGCAG TGGTTTAACA ATATTTACCA AACACTTTAT CAGCAAGGCG TAACGGGTTG GTGGGGTGAT TTAGGTGAGC CGGAAGTTCA CCCCAGCGAT ACATTACATA CCCTTAGCGA TGGCAGTGTC GTTAATGCTG ATGCCATTCA TAATGTTTAT GGCCATCAAT GGGCAAAAAT GGTTTTTGAG AATCAACTTA AGTTGAGCCC TGATCAGCGA CCGTTTATTC TAATGCGTTC AGGTTTTGCT GGCTCACAAC GCTATGGCAT GATCCCGTGG ACCGGTGACG TTAGTCGCTC TTGGGGTGGC TTAAAGCCGC AAGTTGAGTT GAGCTTACAA ATGAGTTTAT TAGGCATGGC TTATACTCAT TCTGATTTAG GTGGTTTTGC CGGCGGCGAG AAGTTTGACC AAGAAATGTA TATCCGTTGG TTACAATATG GCATATTCCA GCCAATCTAC CGTCCACACG GTCAAGATAA CATTGCACCA GAAGCTGTAT TTCATGACAA ACGCACGCAA GATATTTTAC GAGAGTACAT AAAACTCAGA TATAAACTGC TGCCATACAA CTACACCCTA GCCTATCAAA ACAGCACCAC CGGTATGCCT TTAATGCGTC CGCTTTTCTT TGAAGAGCAG CTTGAACATA AAGAAAAATC AACTGCATTT GATAACGCGA GTAGCTACTT GTGGGGTGAT GCTTTTCTAG TAACCCCTGT TGTTTCAGCA GATGTTAGCT CTGTAGCAAT AGATTTACCT GCTGGCGTTT GGTTTGATTA TTTCACCAAT GAAAATGAGC CAAGTAAAAA GTATCAAGGT AATCAAACCA TCAATTTACC GACTACTTTA GAGAAACTGC CAGTACTAGT ACGCGCTGGT GCGTTTATTC CCATGATAGA TGATATTCAA TCAACACAGG ATTATGACGC CAGTAAATTA ACCTTACATT ATTATGCAGA TAAATCAGTC GCTACCGCTG ACTATGAAAT GTATGAAGAC GATGGCAAAA CCTATCAAGC TATCGAAAAA GGTTTATTTG AATTACTACA ATTCTCAGCT AATCAACAGC AGCAACATTT GAGCATAAAC CTAAATCGCA AAGGCAAAGG TTATAACGGC ATGCCCAAAG AACGCAACAT GACTGTCGTA ATTCATAACA TCACGCAAGC CCCAAGTAAC ATCAAATTGA ACAATAAAGT GATAAAAAAT GGCGTTTGGC AAGATAAAAA TAACACCTTA ACCGTCACTT TTGCTTGGCA GCATCAACCT CTAACCTTAA CGATACAATA A
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Protein sequence | MRSFTLKYFT INSLTCLLTG LLTCLVISTP SLASSGNYLN HKLAGDSLVI TTNSVEVTLS AYGEGAIAAH YQNLEKKLPA SQLPSFAIKE NAHNSKFVIT EDKNQLTLTL NKLSAVINKA PFSISYYQKN KHQKDTLLIS EQKGFFSDTV LEENKSLAVQ GFRFHLTDTE KLLGGGERVL GMDRRGHSFP LYNRAHYGYT TQSEQMNFSI PAVMSSNKYI VLFDNSAKGY MDLAKKEKNT LEFSAVAGRM AYIVFSADSY PKLLNNYVDV TGKQPLPPRW SLGNYASRFG YRSEAQVRAT VNKFIDLDFP LDALILDLYW FGKDIKGHMG NLAWDKEAFP EPEKMISDIK EQGVNTILIT EPFVLSTSAK WQDAVEQQAL AKDAQGNAKQ FDFYFGNTGL VDVFNDKGQQ WFNNIYQTLY QQGVTGWWGD LGEPEVHPSD TLHTLSDGSV VNADAIHNVY GHQWAKMVFE NQLKLSPDQR PFILMRSGFA GSQRYGMIPW TGDVSRSWGG LKPQVELSLQ MSLLGMAYTH SDLGGFAGGE KFDQEMYIRW LQYGIFQPIY RPHGQDNIAP EAVFHDKRTQ DILREYIKLR YKLLPYNYTL AYQNSTTGMP LMRPLFFEEQ LEHKEKSTAF DNASSYLWGD AFLVTPVVSA DVSSVAIDLP AGVWFDYFTN ENEPSKKYQG NQTINLPTTL EKLPVLVRAG AFIPMIDDIQ STQDYDASKL TLHYYADKSV ATADYEMYED DGKTYQAIEK GLFELLQFSA NQQQQHLSIN LNRKGKGYNG MPKERNMTVV IHNITQAPSN IKLNNKVIKN GVWQDKNNTL TVTFAWQHQP LTLTIQ
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