Gene CPS_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0983 
Symbol 
ID3521761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp992036 
End bp994546 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content40% 
IMG OID637283448 
Productglycosy hydrolase family protein 
Protein accessionYP_267732 
Protein GI71281290 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTTCAT TCACATTGAA ATACTTCACC ATTAATTCAT TAACTTGTTT ACTCACTGGC 
TTATTAACTT GCTTGGTTAT ATCAACGCCA TCATTGGCAA GTTCGGGGAA TTACCTTAAT
CATAAATTAG CAGGTGATAG CCTTGTTATC ACCACTAACT CAGTAGAAGT AACTTTGAGT
GCTTATGGTG AAGGCGCAAT AGCAGCACAT TACCAAAACC TTGAGAAAAA GCTGCCAGCT
AGCCAACTGC CCTCCTTTGC CATCAAAGAA AATGCACATA ACAGTAAGTT TGTTATAACA
GAAGATAAGA ATCAGCTGAC ATTAACCTTA AATAAGCTAA GTGCGGTGAT CAACAAAGCG
CCCTTTTCTA TTAGTTATTA CCAGAAAAAT AAGCACCAGA AAGACACATT ACTTATCTCT
GAGCAGAAGG GTTTCTTTAG CGATACCGTT CTTGAAGAAA ATAAAAGCTT AGCTGTTCAA
GGATTTCGCT TTCACCTAAC TGACACTGAA AAACTACTTG GCGGTGGTGA ACGAGTGCTT
GGTATGGATA GACGCGGTCA TAGTTTCCCT TTATATAATC GAGCACATTA CGGCTATACC
ACACAATCAG AGCAAATGAA TTTCTCAATA CCCGCAGTAA TGTCGAGTAA TAAATATATT
GTGCTATTTG ATAACTCCGC CAAGGGTTAT ATGGATCTAG CGAAAAAAGA AAAGAATACC
CTTGAGTTTT CTGCCGTTGC AGGTCGAATG GCTTATATTG TATTTTCTGC TGATTCTTAC
CCTAAACTGC TCAATAACTA TGTTGATGTT ACCGGTAAAC AACCGCTACC TCCGCGTTGG
TCTTTAGGTA ACTATGCTTC ACGTTTTGGT TATCGCTCAG AAGCCCAAGT AAGAGCAACA
GTAAATAAAT TTATCGATTT AGATTTTCCT CTTGATGCCT TAATTCTAGA TTTATATTGG
TTTGGTAAAG ACATTAAAGG CCATATGGGT AATTTAGCTT GGGATAAAGA AGCCTTCCCT
GAACCTGAAA AAATGATAAG TGATATTAAA GAGCAAGGCG TAAACACTAT CTTGATCACT
GAACCCTTTG TACTGAGTAC TTCAGCTAAG TGGCAAGATG CTGTTGAACA GCAAGCATTA
GCCAAAGATG CACAGGGCAA CGCTAAACAG TTTGATTTTT ATTTTGGTAA TACCGGTTTA
GTTGATGTCT TCAATGACAA AGGACAGCAG TGGTTTAACA ATATTTACCA AACACTTTAT
CAGCAAGGCG TAACGGGTTG GTGGGGTGAT TTAGGTGAGC CGGAAGTTCA CCCCAGCGAT
ACATTACATA CCCTTAGCGA TGGCAGTGTC GTTAATGCTG ATGCCATTCA TAATGTTTAT
GGCCATCAAT GGGCAAAAAT GGTTTTTGAG AATCAACTTA AGTTGAGCCC TGATCAGCGA
CCGTTTATTC TAATGCGTTC AGGTTTTGCT GGCTCACAAC GCTATGGCAT GATCCCGTGG
ACCGGTGACG TTAGTCGCTC TTGGGGTGGC TTAAAGCCGC AAGTTGAGTT GAGCTTACAA
ATGAGTTTAT TAGGCATGGC TTATACTCAT TCTGATTTAG GTGGTTTTGC CGGCGGCGAG
AAGTTTGACC AAGAAATGTA TATCCGTTGG TTACAATATG GCATATTCCA GCCAATCTAC
CGTCCACACG GTCAAGATAA CATTGCACCA GAAGCTGTAT TTCATGACAA ACGCACGCAA
GATATTTTAC GAGAGTACAT AAAACTCAGA TATAAACTGC TGCCATACAA CTACACCCTA
GCCTATCAAA ACAGCACCAC CGGTATGCCT TTAATGCGTC CGCTTTTCTT TGAAGAGCAG
CTTGAACATA AAGAAAAATC AACTGCATTT GATAACGCGA GTAGCTACTT GTGGGGTGAT
GCTTTTCTAG TAACCCCTGT TGTTTCAGCA GATGTTAGCT CTGTAGCAAT AGATTTACCT
GCTGGCGTTT GGTTTGATTA TTTCACCAAT GAAAATGAGC CAAGTAAAAA GTATCAAGGT
AATCAAACCA TCAATTTACC GACTACTTTA GAGAAACTGC CAGTACTAGT ACGCGCTGGT
GCGTTTATTC CCATGATAGA TGATATTCAA TCAACACAGG ATTATGACGC CAGTAAATTA
ACCTTACATT ATTATGCAGA TAAATCAGTC GCTACCGCTG ACTATGAAAT GTATGAAGAC
GATGGCAAAA CCTATCAAGC TATCGAAAAA GGTTTATTTG AATTACTACA ATTCTCAGCT
AATCAACAGC AGCAACATTT GAGCATAAAC CTAAATCGCA AAGGCAAAGG TTATAACGGC
ATGCCCAAAG AACGCAACAT GACTGTCGTA ATTCATAACA TCACGCAAGC CCCAAGTAAC
ATCAAATTGA ACAATAAAGT GATAAAAAAT GGCGTTTGGC AAGATAAAAA TAACACCTTA
ACCGTCACTT TTGCTTGGCA GCATCAACCT CTAACCTTAA CGATACAATA A
 
Protein sequence
MRSFTLKYFT INSLTCLLTG LLTCLVISTP SLASSGNYLN HKLAGDSLVI TTNSVEVTLS 
AYGEGAIAAH YQNLEKKLPA SQLPSFAIKE NAHNSKFVIT EDKNQLTLTL NKLSAVINKA
PFSISYYQKN KHQKDTLLIS EQKGFFSDTV LEENKSLAVQ GFRFHLTDTE KLLGGGERVL
GMDRRGHSFP LYNRAHYGYT TQSEQMNFSI PAVMSSNKYI VLFDNSAKGY MDLAKKEKNT
LEFSAVAGRM AYIVFSADSY PKLLNNYVDV TGKQPLPPRW SLGNYASRFG YRSEAQVRAT
VNKFIDLDFP LDALILDLYW FGKDIKGHMG NLAWDKEAFP EPEKMISDIK EQGVNTILIT
EPFVLSTSAK WQDAVEQQAL AKDAQGNAKQ FDFYFGNTGL VDVFNDKGQQ WFNNIYQTLY
QQGVTGWWGD LGEPEVHPSD TLHTLSDGSV VNADAIHNVY GHQWAKMVFE NQLKLSPDQR
PFILMRSGFA GSQRYGMIPW TGDVSRSWGG LKPQVELSLQ MSLLGMAYTH SDLGGFAGGE
KFDQEMYIRW LQYGIFQPIY RPHGQDNIAP EAVFHDKRTQ DILREYIKLR YKLLPYNYTL
AYQNSTTGMP LMRPLFFEEQ LEHKEKSTAF DNASSYLWGD AFLVTPVVSA DVSSVAIDLP
AGVWFDYFTN ENEPSKKYQG NQTINLPTTL EKLPVLVRAG AFIPMIDDIQ STQDYDASKL
TLHYYADKSV ATADYEMYED DGKTYQAIEK GLFELLQFSA NQQQQHLSIN LNRKGKGYNG
MPKERNMTVV IHNITQAPSN IKLNNKVIKN GVWQDKNNTL TVTFAWQHQP LTLTIQ