Gene CPS_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0979 
Symbol 
ID3521922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp986274 
End bp986939 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content38% 
IMG OID637283444 
Productputative beta-phosphoglucomutase 
Protein accessionYP_267728 
Protein GI71281450 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01990] beta-phosphoglucomutase
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACAA GTGCAGTAAT ATTCGACTTA GACGGTGTGT TAACTGATAC CGCAGAATTT 
CACTTTATAG CCTGGCAAGC TATAGCTAAT AAACTCGACA TTACCTTTGA TAGAGAAGAC
AACGAAAAGC TTAAAGGGGT GGATCGTGAA AACTCTTTAA AATACATTTT ATCTAAGGGT
AATTTAGTTG TTAGCACAAC AGAATTTGAA CAATTGCTCA AAGAAAAAAA TGACCAATAT
CTAACCTTAA TCGACGAAGT TAACCCAAGT CATTTGTTTG ATGGAGTATT AAATTGCTTT
GCCGTGTTAA AAAAGTCTAA CGTTAAGATT GGCTTAGCTT CTGCTAGTAA AAATGCTAGC
TTAGTCATTA CTAAACTCGG CATTGAGCAT TTATTTGATT TCATTGGTGA TGCCGCTTCC
GTTGCCAACA GTAAACCTGC ACCCGATATT TTTCTTTCGG TCGCACATGG ACTGAAGGTA
TCACCAAAAA ACTGCATCGG TGTTGAAGAT GCTGTCGCGG GTGTAAGCGC AATAAAGTCT
GCCAATATGT TTGCTGTAGG CATAGGTGAA AGCCAAGTAC TCACACAAGC AGATTTAGTT
TTCCCTAGCA TGAGTGAGTT TGATTTTAAA CGAGTCGAAA CAGCATTTTT ATTATCTGCT
ACTTGA
 
Protein sequence
MITSAVIFDL DGVLTDTAEF HFIAWQAIAN KLDITFDRED NEKLKGVDRE NSLKYILSKG 
NLVVSTTEFE QLLKEKNDQY LTLIDEVNPS HLFDGVLNCF AVLKKSNVKI GLASASKNAS
LVITKLGIEH LFDFIGDAAS VANSKPAPDI FLSVAHGLKV SPKNCIGVED AVAGVSAIKS
ANMFAVGIGE SQVLTQADLV FPSMSEFDFK RVETAFLLSA T