| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0974 |
|---|
| Symbol | |
|---|
| ID | 3520179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 978791 |
|---|
| End bp | 979813 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637283439 |
|---|
| Product | putative sugar-binding protein |
|---|
| Protein accession | YP_267723 |
|---|
| Protein GI | 71279718 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGAAA AATCCACATC ATTTGATATC GCATACCGGG CAGGGGTGTC TCAATCTACT
GTCTCTAGAG CTTTGCGAAA TAGTCCATTA GTGAATGAGG CAACACGAGA GAAAATTCAA
GCTATTGCAA AAGAGTTAAA TTATAAGGTT GATAAAAATG CCAGTAATTT ACGCTCACAG
CAGAGTGATA CTATTGCGTT GTTGTTATTT GAAGATCCTA CCAATGATGA TTCAGCAATA
AATCCATTTT TCTTGTCTAT GTTGGGCAGT ATTACTCGAG CTTGTTCGCA GAAAGGTTAT
GATCTATTAG TGTCTTTTCA ACAAGCCAGT GATGACTGGC ATGCTGACTT TGAAGATAGT
AATAAAGCTG ATGGTTTGAT TTTGTTAGGT TATGGTGACT ATGTTGACTA CGAAGAGAAG
TTAGTCAAGT TGTTAGACCA AGGTACTCAT TTTGTTCGCT GGGGAGCAGA AGTTAAGAAT
TTACCGCTTA TTTCGGTTGG TTGTGATAAC TACCAAGGTG GTAAAGAAAT GACAGAGCAT
CTCATCAAAA AAGGCCGCAA AAACCTTGCC TTTTTAGGGA GTGCCTCCAC TCATGCACCA
GAGTTTTTTG AACGCTATAA AGGCCATTGT CAGTCTTTAG CCGACAATAA CATGGCAGTG
AACCAAGGTT TGCAATTCAA TGCGCTTTAC ACTGAAGAAG CGGGCTATCA GGCCGCATGC
CAATTAATCT CAAGTGGAGA GCCCTTTGAT GCCATTTGCG CTGCTTGTGA TCTTATTGCT
ATAGGTGCCA TGCGTGCACT ACAAGAACAT AATATCGATA TTCCCGAGCA AGTTGCTCTC
GTAGGTTTTG ATGATATTGC TATTGCCAGT TTTACTTTCC CAGCGCTAAC AACAGTGAAA
CAAGACACAC AATTGGCCGG CGAGTTATTA GTCAATACCC TACTGGCTAT GATAAGTGGT
GAAGAAGTGA AAACTACTTT GATCCCGCCT GAATTAGTTA TTCGTAAATC TTGTGGCAGT
TAG
|
|---|
| Protein sequence | MKEKSTSFDI AYRAGVSQST VSRALRNSPL VNEATREKIQ AIAKELNYKV DKNASNLRSQ
QSDTIALLLF EDPTNDDSAI NPFFLSMLGS ITRACSQKGY DLLVSFQQAS DDWHADFEDS
NKADGLILLG YGDYVDYEEK LVKLLDQGTH FVRWGAEVKN LPLISVGCDN YQGGKEMTEH
LIKKGRKNLA FLGSASTHAP EFFERYKGHC QSLADNNMAV NQGLQFNALY TEEAGYQAAC
QLISSGEPFD AICAACDLIA IGAMRALQEH NIDIPEQVAL VGFDDIAIAS FTFPALTTVK
QDTQLAGELL VNTLLAMISG EEVKTTLIPP ELVIRKSCGS
|
|---|
| |