Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0958 |
Symbol | |
ID | 3519423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 966746 |
End bp | 967804 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637283423 |
Product | ompA family protein |
Protein accession | YP_267707 |
Protein GI | 71279065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0803735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGT TCAACATTAC CCTGTTAGCT GCATTAATTA GTTCACCATT AGCTGCAGAA GGCATTGATA AAACATGGGA AGTAGGCGTG TTTGGCGATT ATATTAAGTC AGACACAGGT AAAGAAAATA AGATGGACTG GCAACAAATT GAAGCTGGCA AGGGCTTAGG TATTGATTTA CAAAAAATCA TTAACGAACA ATGGAATGCT CGTATAGAGT TAGCAAAAAC TCGTTACGAC ATTAACAATG GTAATGATAC TGATTATGGT ACACGGTTTG GCCTTGACGC TATTTATAAG ATTGAAGATA CAGGTATTTA CGCTTTCGCT GGGGTAAAAC GTTTTAATAA CGTGAAAAGC TACAACGCGG TTAATATAGG CCTTGGTTAT AACGTCGATA TTAATGATTG TTTCTCTTTA TACAGCGAAG CGGTTGTTTA TCGTGATGTC GACTATGGTT TTACAGACCA AGGCTTTAAA ATCGGTGTGA AATACGTTTT TGGTGACGTG AAAAAATCTC CTGTTGTTAA GAAAGCGGTA TCTCAGGAAG TTGCTGCAAT ACCAGTAGTT GCAGCAGTAA TTCTTGCTGA TACTGATAAT GATGGCATTA ATGATAAGCA AGATAACTGT AAAAATACGC CAGCAAACGT AAAAGTTGAT TCAAGTGGTT GTCCACTCTT TTTAGATACA GCTGTAGACG TTGACTTGAA CGTGGCGTTC GAAAACAATA GTTCACAGAT AAAAGCAGAA ACAATGAATG ATATTCAACG TTTAGCTGAT TTTATGAAGG AATATAAAAA CACAAGTGTT GTTATTGAAG GGCATAGTTC AGCTGCAGGT AGCGCTAAAT ATAACTTAGC ACTTTCACAA AAACGTGCTG ATGCGGTTAA GAGTCTATTA ATTAATAAAT TTGATATAGA GGAAAGCCGT TTATCTGCCA AAGGTTTTGG TGAAACACAA CTAATTTCTA AGGGCAATAC AGCTGCCGAT CATGAGTTAA ATCGTAGAGT TATTGCAAAA ATTGAAGCTA CCGTGAAAAA AATGATGATA AAAAGCTAA
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Protein sequence | MKTFNITLLA ALISSPLAAE GIDKTWEVGV FGDYIKSDTG KENKMDWQQI EAGKGLGIDL QKIINEQWNA RIELAKTRYD INNGNDTDYG TRFGLDAIYK IEDTGIYAFA GVKRFNNVKS YNAVNIGLGY NVDINDCFSL YSEAVVYRDV DYGFTDQGFK IGVKYVFGDV KKSPVVKKAV SQEVAAIPVV AAVILADTDN DGINDKQDNC KNTPANVKVD SSGCPLFLDT AVDVDLNVAF ENNSSQIKAE TMNDIQRLAD FMKEYKNTSV VIEGHSSAAG SAKYNLALSQ KRADAVKSLL INKFDIEESR LSAKGFGETQ LISKGNTAAD HELNRRVIAK IEATVKKMMI KS
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