Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0936 |
Symbol | |
ID | 3522643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 940893 |
End bp | 943145 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637283401 |
Product | TonB-dependent receptor |
Protein accession | YP_267685 |
Protein GI | 71282170 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCT ATAACAAAAA ATTAAGTTAC CTCGCTTTAG CTATTGCCAG CGCGTTAACC ACTAACATTG CCCTTGCAGA AGAAGCAAAT GAATCAACAA GCGCTCAAGA TAACTCAGGT CTTGAACGTA TTGAAGTTAC CGCTCGTAAA ACCGTAGAGA CTCTGCAGAA TGTTCCTGTC GCCGTTACCT CTATTGGTGC AGAACAACTT GAACAGAACG GTATTAGCGT GATGACAGAA GTTCAGCAAT TCTCACCAAA TACTACCTTA CAAAGTAGCC GTGGTACTAA CTCAACATTG ACCGCCTTTA TCCGCGGTGT TGGTCAAGAG GATCCTTTAT GGGGTTATGA ACCGGGCGTT GGTATTTATG TTGATGACGT ATATATTGCA CGTCCACAAG GCGCTGTGCT TGATATTCTT GATGTTGAAC GTATTGAAGT ATTACGTGGT CCACAAGGTA GTTTATACGG AAAAAACACC ATAGGTGGCG CAATCAAATA TGTCACCAAA AAAATGTCAG GAGATGCGGA GTTTGACATA AAAGCAACTT TTGGTAATTA CGCACGTCAA GATTATAAAG TGGCTGGTGC GGTGCCAGTA GTTGATGACA AACTCTATGT TGGTTTTGCT TTAGCCAGCT TATCTCGTGA TGGTTACGGT GAGTTTTTAC AATCAGGCTT ACCTGGGCAA GATTTAGAAA ACTATAACAA GGATGTTTTT GCTGGTCGAG TAACGGTTGA ATTTACCCCT ACAGATGATT GGTTCTTCCG TTTTAATTAC GATAATACCC AAGATGATTC CAACGCTAAA GGTGGTTACC GTTTATTACC TAGTATAGTA ACCGATGCGC CTATACCTGA TAGTGTATAT GATTCATATA CAAGCTTACC AACCAAAAAT GTGGTTGAGA ATGAAGGCTG GAGTTTAACC GCTGAATATT ATATTAATGA TTATTGGTCA TTAAAATCAG TGACGGCAGC TCGTGAGAAT TATTCTCCAA CGAATATTGA TTTTGATAAT ACTCCTTTAC AAATTTTTGA TGTACCAGCT ATTTATGATG ATGAGCAATT CTCGCAAGAA ATTCAGTTAA ATTATAATGG AGATAACTTA TCATTTGTTT CTGGATTATA TTATTTTGAT GGCGAGTCAT GCGGTCATTA TGACGCCATC ATTTTTCAAA GTTTAACAGC AGAAAAAAGT GGTTGTAATA ATAGCGAAAG TTATGCTGTT TATGCACAAG GTTCATATAA TCTGACTGAA AAGTTATCGT TTACTTTAGG TGCTCGTTAT ACAGAAGAAG AAAAATATGC GAATGTAAAT GATGATCTCC GCTTTTCAAT AGAATACCCA GAGTCAAACT GGATTCCTGG GTATACACGT GGAGATTTAC CAGTAACAGA AGTATTAAAT GGCAACAAAA CTTGGTCACG TTTCACACCT AAAGTGGGTG TCGAGTACCA AGTTGATGAA GATATGATGG TATTTGCTAG TTATTCACAA GGTTTCAAAT CGGGTACCTT TAATCCTCGT GCATCAACTA ATGAACCAGC AGTAAATCCA GAAATAGTTG ATTCTGTTGA GCTTGGTATA AAAAGTGAGT GGTTTAATCA ATTACGTGTT AATGCAACAG TTTTTGCACT AGAACATAAA GACCGTCAAT ACAAAAGTGT GGTACCAAAT GAAGATCCTA CCGTGTTAGA TTCACGCTTA GGTAACATTG GTCAATCTGA AGCGATAGGT TTAGAGCTTG AAGTGGAATA TGCTGCAACA GAGTCACTAA GCTTTAACTT TGCTTTGGGT TATATTGATA GTGAATTTAC TGAAGTATTA AGCTGGAATG GTAATGGTTA TGATGATATT TCTGATATTT ATACTGTAGC CAATACGCCA GATACTACAG CTAATTTTGG TGTCACTTAC GATATTGAAA CTTCTGTTGG TACTTTTGTT ATAAATAGTA ATTATTACTA TCGTGACGAT TATGCTTTGG TTGAACTTGA TAATAGGTTG ACTCAAGATG CTTATGGTTT ACTTAACTTG GGTATAAATT GGTACAGTAA TGAAGGTGAT TGGACTGCCG CTCTACATTG GAAAAATATT ACTGATGAAG AGTATATGGT GGGTGCTTAT GACTTTACTG GCGGCCAAGA TGAAGAGGGT AATTGGTTAC CTGGCTTTGG TGGCGATACT ACACTTATTG CTTATTATGG TGACCCAACA ACTATTTCAT TAACTATTGG CTATCAGTTT TAA
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Protein sequence | MKRYNKKLSY LALAIASALT TNIALAEEAN ESTSAQDNSG LERIEVTARK TVETLQNVPV AVTSIGAEQL EQNGISVMTE VQQFSPNTTL QSSRGTNSTL TAFIRGVGQE DPLWGYEPGV GIYVDDVYIA RPQGAVLDIL DVERIEVLRG PQGSLYGKNT IGGAIKYVTK KMSGDAEFDI KATFGNYARQ DYKVAGAVPV VDDKLYVGFA LASLSRDGYG EFLQSGLPGQ DLENYNKDVF AGRVTVEFTP TDDWFFRFNY DNTQDDSNAK GGYRLLPSIV TDAPIPDSVY DSYTSLPTKN VVENEGWSLT AEYYINDYWS LKSVTAAREN YSPTNIDFDN TPLQIFDVPA IYDDEQFSQE IQLNYNGDNL SFVSGLYYFD GESCGHYDAI IFQSLTAEKS GCNNSESYAV YAQGSYNLTE KLSFTLGARY TEEEKYANVN DDLRFSIEYP ESNWIPGYTR GDLPVTEVLN GNKTWSRFTP KVGVEYQVDE DMMVFASYSQ GFKSGTFNPR ASTNEPAVNP EIVDSVELGI KSEWFNQLRV NATVFALEHK DRQYKSVVPN EDPTVLDSRL GNIGQSEAIG LELEVEYAAT ESLSFNFALG YIDSEFTEVL SWNGNGYDDI SDIYTVANTP DTTANFGVTY DIETSVGTFV INSNYYYRDD YALVELDNRL TQDAYGLLNL GINWYSNEGD WTAALHWKNI TDEEYMVGAY DFTGGQDEEG NWLPGFGGDT TLIAYYGDPT TISLTIGYQF
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