Gene CPS_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0934 
Symbol 
ID3519011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp938739 
End bp939635 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content41% 
IMG OID637283399 
ProductLysR family transcriptional regulator 
Protein accessionYP_267683 
Protein GI71278365 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.886955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT CTTTTGAACA GCTAAAAAGT ATGGTTGTTT TTGCCCAAGT GATTGAGCAG 
GGTACGCTCA GTGGTGCTGC TAAACATATT GGACTCTCTC GTGCGGTGGT GAGTTACCAT
ATAAAAAAAC TTGAAGCTCA ATTAGGTATA AAACTACTGA ATCGCTCTAC TCGCACTATT
TCAGCGACTG AAGCAGGGCT TGAGTATTAT CAATATTGCC GCGTTATCGC TGAGCAAGCA
TCAGCGGCTA ATCGACAGAT TGAAAATCTT AAACATGAAC CGGTCGGTTT ATTAAAGATT
ACCTGTCCAG TTAATGTTGG TTTGCAAACT ATTGTTCCTG CACTTAATGA GTTTCGTACC
ATTTACCCTA AAATTGAACT TGATGTCATG CTTACGGATG AAGTGGTAAA TATTATCAAA
GAAGGCATAG ACCTAGCTAT TCGTGGTGCT CCTTTAGCCG ATTCAGGCCT ACAAGCAGCA
AAATTATCAA CACTCAGCAC TTGTCTTTGT GGCTCACCCG CATATTTTGA AAAGTTTGGT
TTTCCTAAAC ACCCAACGGA GCTGAATAAA CATCAATGGG TGCTGTATAA GTTAACTGCG
GGTTCGCTCG AGCTGACAAA AGGTAGTCGT TCTTTTAGCA TTGAAATGAA AGGCACAATC
AGCACAAATA ATGCGGCAGC AAGAACCGCT TTTGTTGAAG GTGGCCACGG TCTAGGTCGT
ATTCCTGTTT ATGATGCAAA ACCTAGAATC AAAGCAGGGC AGTTGCTTTC GGTACTTGAT
GATTACGATA TGAGGGATAT TCATGTCTAT GGGGTATTTC CTCCAGGGAA TGCCGAGTCG
AAGAAATTGC GGTTGTTGAT AGATTTTTTA AAAGCATACT TCTTAAAGAA TCAGTAA
 
Protein sequence
MNISFEQLKS MVVFAQVIEQ GTLSGAAKHI GLSRAVVSYH IKKLEAQLGI KLLNRSTRTI 
SATEAGLEYY QYCRVIAEQA SAANRQIENL KHEPVGLLKI TCPVNVGLQT IVPALNEFRT
IYPKIELDVM LTDEVVNIIK EGIDLAIRGA PLADSGLQAA KLSTLSTCLC GSPAYFEKFG
FPKHPTELNK HQWVLYKLTA GSLELTKGSR SFSIEMKGTI STNNAAARTA FVEGGHGLGR
IPVYDAKPRI KAGQLLSVLD DYDMRDIHVY GVFPPGNAES KKLRLLIDFL KAYFLKNQ