| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0925 |
|---|
| Symbol | fadH1 |
|---|
| ID | 3520693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 929218 |
|---|
| End bp | 931260 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637283390 |
|---|
| Product | 2,4-dienoyl-CoA reductase |
|---|
| Protein accession | YP_267674 |
|---|
| Protein GI | 71280229 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA CTGCCTACCC ACATTTATTA GCGCCACTAG ACCTTGGCTT TACCCAATTA
GCTAACCGTG TCCTTATGGG ATCCATGCAT ACTGGCTTAG AAGAAGAGCG CGGTGGTTTT
GCAAAATTAG CTGCATTCTA TCAAGCAAGA GCGAAAGGCG GTGTGGGCTT GATCGTTACC
GGTGGTGTTA GTCCTAATCT ACGCGGCAGA ATAGCACCGT TTGGTAGTGA GCTAAGTCAT
TTTTGGCAAG CAAATAAACA CAAACAAGTA ACAGACGCCG TTCATCAGTA CCCAACTAAA
ATCTGCTTGC AACTATTACA TACGGGTCGA TACGCCTATC ATCCTTTTGG TGTGGCCCCC
AGTAAAATCA AATCACCTAT TTCTCCTTTT ACGCCTAAAG CAATGTCAGT GCGTCAAATT
AAATCGACCA TTAAAGATTA TGCTTACTCA GCCAAGTTAG CGGCTAAAGC AGGCTATGAT
GGTGTGGAAA TTATGGGCTC TGAAGGTTAT TTAATTAACC AGTTTGCTTG TGTAAGAACA
AATAAGCGTA ACGATGAGTG GGGCGGTAGT ATTGAAAACA GAATGCGCCT AGCTATTGAA
ACGATTAAAG CAGTACGCGC TAAAGTGGGC GAAAATTTTA TCATCATCTT TCGTTTATCC
ATGTTGGATT TAGTTGAAGG TGGCAACAGT TGGGAAGAAG TTGTCACTAT GGCAAAAGCG
GTAGAGCAGG CTGGTGCCAC ACTGATTAAT ACTGGTATTG GTTGGCATGA AGCACGCGTT
CCGACCATAG TTACTTCAGT ACCTAGAGCT GCATTTACCT GGGTCACTGA AAAAATGAAA
AAAGAAGTGT CTATACCCCT AATCACAACT AACAGAATTA ATACGCCTGA AGTTGCTGAA
GAAGTGTTAG CGACGGGGCA AGCTGATATG GTGTCAATGG CGAGACCTTT CTTGGCGGAT
GCCGACTTTG TTAATAAAGC CGCAGAAAAT AAAGCCGATG AAATTAATAC CTGCATTGGT
TGTAACCAAG CGTGCTTAGA TCACGTGTTT GCACAAAAGC GAGCCTCATG TTTAGTCAAC
CCAATGGCAT GTTATGAAAC AGAGCTTGTT ATAGAAAAAG CTAAACAAGT TAAAAAATTA
GCCGTGATAG GTGCCGGACC TGCGGGATTA GCTTTTAGTG TTTATGCTGC GGAGCGAGGA
CATCATGTTG AACTATTTGA TAAAATTAGC GAGATAGGTG GCCAGTTTAA TGTCGCTAAA
CAAGTACCCG GTAAAGAAGA ATTTTTTGAG ACATTACGCT ATTTTAACAA ACAGATAAGT
TTGCTTGATA TTAAGGTGTA TCTTAACACT GAGCAAAGTG CAGAAAAATT ACTCGCTGCT
GGTTTTGATG AAGTGGTATT AGCAACAGGT ATAAAACCAA GAAAGCTCGA TATTAAAGGT
TTAGAGGAAG GTTATACCAG TAATAAAGTA CTTACATATT TACAAGTGCT GCGAGATAAA
GTTGAGGTTG GTAACAAGGT CGCGATTATA GGTGCTGGCG GTATTGGCTT TGATGTAGCC
ACTTATTTAT CAGAAAAATC ATTAACTAAT GACCCAGAAG CATGGCTTAA AAATTGGGGG
GTTGATAAGC AATACCTGAA AAATGGGGCA TTGCTAAGTA AACAAGATAT ACCTAAGCAT
GATCCGGCAA GGCATATTAC TCTGATACAA CGCAAAACGA CTAAAGTGGG CAAAGGCTTG
GGTAAAACAT CAGGCTGGGT ACATAGAGCC AATTTAGTAA AACAAGGCGT TACTATGTTG
GCTGGCGCAA GTTATAAAGC CATTACTGAG AAAGGCTTAG TGATTGAAGT TGATGGTAAA
GAGCAATTGC TTGAAGTTGA TAATATCATT ATCTGCGCAG GGCAAGAATC GAATCGAGAT
TTACAGCAAA AGCTAATTGA TGGTGGTTTA CCTGTACATC TAATTGGTGG AGCTAATGTT
GCTGCGGAAC TTGATGCTAA ACGTGCGATA CGCCAAGCGG CAGAGTTAGC GGTGAAAATT
TAG
|
|---|
| Protein sequence | MTTTAYPHLL APLDLGFTQL ANRVLMGSMH TGLEEERGGF AKLAAFYQAR AKGGVGLIVT
GGVSPNLRGR IAPFGSELSH FWQANKHKQV TDAVHQYPTK ICLQLLHTGR YAYHPFGVAP
SKIKSPISPF TPKAMSVRQI KSTIKDYAYS AKLAAKAGYD GVEIMGSEGY LINQFACVRT
NKRNDEWGGS IENRMRLAIE TIKAVRAKVG ENFIIIFRLS MLDLVEGGNS WEEVVTMAKA
VEQAGATLIN TGIGWHEARV PTIVTSVPRA AFTWVTEKMK KEVSIPLITT NRINTPEVAE
EVLATGQADM VSMARPFLAD ADFVNKAAEN KADEINTCIG CNQACLDHVF AQKRASCLVN
PMACYETELV IEKAKQVKKL AVIGAGPAGL AFSVYAAERG HHVELFDKIS EIGGQFNVAK
QVPGKEEFFE TLRYFNKQIS LLDIKVYLNT EQSAEKLLAA GFDEVVLATG IKPRKLDIKG
LEEGYTSNKV LTYLQVLRDK VEVGNKVAII GAGGIGFDVA TYLSEKSLTN DPEAWLKNWG
VDKQYLKNGA LLSKQDIPKH DPARHITLIQ RKTTKVGKGL GKTSGWVHRA NLVKQGVTML
AGASYKAITE KGLVIEVDGK EQLLEVDNII ICAGQESNRD LQQKLIDGGL PVHLIGGANV
AAELDAKRAI RQAAELAVKI
|
|---|
| |