| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0916 |
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| Symbol | |
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| ID | 3522181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 918971 |
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| End bp | 919915 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637283381 |
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| Product | RNA pseudouridine synthase family protein |
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| Protein accession | YP_267665 |
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| Protein GI | 71281709 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCG ACAAATTGAC CACTTCGACT CCCCCAAAAC GTTTAAATAA ATACATTAGT
GATTCTGGTT TTTGTTCGCG CCGTAGTGCC GATAAAATGA TAGAAGCCAA TCGGGTAACC
ATCAATGATA AAGTGCCAGA GCTTGGTACT AAAGTGTTGG CGGGTGATGT CGTTAAAGTA
GATGGATATG ATATTGCTCC AATTAGTGAT GACAAGTCGG ATCGTATTTA TATCGCTTAT
AACAAACCTA TTGGCATTAC CTGTACCACT GAAAAACATG TGCGCGGTAA TATTATTGAT
GCCATTGGTC ATAAAAAACG TATTTTTCCT ATCGGTCGAT TAGATAAACC ATCGGAAGGT
TTGATATTTC TCACCAGTGA TGGAGATATT GTTAATAAAA TTTTACGCGC GGAAAATGCT
CACGACAAAG AATATATTGT CACCGTTGAT AAACCTATTA GTGAACGCTT CATCGAGAGA
ATGTCTCGTG GCGTACCTAT TTTAGGGACC ATTACCAAAC CTTGTATTGT GCAAGTTAAA
AGCCGTTTTG AGTTTACCAT TATCCTTACT CAAGGTCTTA ATCGTCAAAT TCGCCGTATG
TGTGAATATC TCGATTATGA GGTTTTAAAA TTAAAACGCT CACGTATTAT GAAAGTTGAG
TTAGGGGATT TAACACCGGG GCAATGGCGA GAATTAACGA TAACTGAAAT GGCCGAAATT
AACCAAGCGG TTGAAGGCTC TAGTAAAACG GCTATTAATA CAGCTCAGCC TAAACAGACG
ACTTCAAGCA TGAATGACCT TGAAGAACTA TCGGCCTCAT TAAATAATGC AGATAATAAA
AGTGAATCGA AAACTGAGCC AAATACAGCT GCAGAAACAT CTTCTAGTAA AGAGGAAGAT
GAAAAAGATG TTTGGCCTTA TAACAGCCAT AAAACAAAAG ACTAA
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| Protein sequence | MSSDKLTTST PPKRLNKYIS DSGFCSRRSA DKMIEANRVT INDKVPELGT KVLAGDVVKV
DGYDIAPISD DKSDRIYIAY NKPIGITCTT EKHVRGNIID AIGHKKRIFP IGRLDKPSEG
LIFLTSDGDI VNKILRAENA HDKEYIVTVD KPISERFIER MSRGVPILGT ITKPCIVQVK
SRFEFTIILT QGLNRQIRRM CEYLDYEVLK LKRSRIMKVE LGDLTPGQWR ELTITEMAEI
NQAVEGSSKT AINTAQPKQT TSSMNDLEEL SASLNNADNK SESKTEPNTA AETSSSKEED
EKDVWPYNSH KTKD
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