Gene CPS_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_0908 
SymbolhutH 
ID3518752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp907180 
End bp908724 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content40% 
IMG OID637283373 
Producthistidine ammonia-lyase 
Protein accessionYP_267657 
Protein GI71278652 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCATA TTACTGAACT AAAAATTATT CCAGGGCAGT TAACGCTTGC TCAATTACGC 
GACGTAAACC GTTTTGACGG TATCAAATAC AGCTTAGATG AAAGTGCTTT TTCTGAGATT
AATAAAAGTG CTAACGCAGT ACAGCAAGTG ATTAAAGATA ATCGTGTTGT TTACGGTATT
AACACAGGTT TTGGCTTATT AGCCAGCACA CGCATTAAAA ATGAAGAGCT AGAATTATTG
CAACGCTCTA TTGTTCTTTC ACACTCAGCA GGTTTTGGTG AGTACATGGA AGACTCAACA
GTGCGTTTGA TGATGGTACT TAAAATAAAC TCACTTTCAC GTGGTTTTTC AGGTATTCGT
TTACAAGTTA TTCAAGCATT AATTACCTTA TTAAATGCTG AAGTATACCC ATGTGTACCA
AAGAAAGGTT CTGTAGGCGC TTCTGGTGAT TTAGCACCAC TTTCTCACAT GGTTTTACCT
TTATTAGGTG AAGGCGAAAT GTCTTACCAA GATCAAGTGA TTCCAGCCGC TGAAGGATTA
AAAATTGCAG GTCTTGAGGT AGTAACCCTA GCAGCAAAAG AAGGTTTAGC GTTATTAAAC
GGCACACAAG CTTCTACAGC GTTTTCTTTA GAAGGTTTAT TCCATGCTGA AGACTTATAC
GCTGCAGGTA CGGTAATTGG TTCTATTTCT GTAGAAGCCG CGATGGGCTC TCGTGCCCCG
TTTGATCATC GTGTACATTT TGTCCGTGGT CAAAAAGGTC AAATTGATGC GGCACGTGCT
TATCGTGAAG TATTAACTGA TAGCTCTGAA ATTGCTGAGG CACACGTTGA TTGTGAAAAA
GTACAAGACC CTTATTCACT TCGTTGTCAG CCTCAAGTAA TGGGTGCTTG TTTAACACAA
ATTCGTCAAG CGGCAGAAGT ATTGCACGTT GAAGCGAATG GCGTAACAGA TAACCCGTTA
GTTTTCGCTA ACGAAGGTGA CTTTATCTCT GCCGGTAACT TCCATGCTGA GCCTGTTGCT
ATGGCCGCTG ATAATTTAGC CTTAGCTATT GCTGAGATTG GTTCATTATC TGAACGTCGC
ATGGCGTTAT TAATTGACTC AAGCTTAAGT AAACTACCAC CATTTTTAGT TGATAACGGT
GGTGTTAACT CTGGCTTTAT GATCGCGCAA GTTACTTCTG CAGCATTAGC TTCAGAGAAT
AAGTCACTTG CTCATCCAGC TTCAGTTGAT AGTTTACCAA CCTCTGCTAA TCAAGAAGAT
CACGTATCTA TGGCATGTTT TGCTGGTCGT CGTTTAGCAG ACATGAGCGA GAATACTAAT
GGCGTTCTTG CCGTTGAGTA CTTAGCCGCA GTGCAAGGTT TAGACTTTAG AGCTCCGCTT
AAGGGCTCGC CTCTTATTGA AAAAGCAAAA GCTAAATTAC GTGAAACAGT TTCTTTCTAC
GATAAAGACA GATACTTTGC ACCTGATATT GTTGAAGCAT CAGAAATTAT CTCTGATGGT
TACTTGAATC AATATATGCC AGAAGGTTTA TTACCTAGCT TTTAA
 
Protein sequence
MNHITELKII PGQLTLAQLR DVNRFDGIKY SLDESAFSEI NKSANAVQQV IKDNRVVYGI 
NTGFGLLAST RIKNEELELL QRSIVLSHSA GFGEYMEDST VRLMMVLKIN SLSRGFSGIR
LQVIQALITL LNAEVYPCVP KKGSVGASGD LAPLSHMVLP LLGEGEMSYQ DQVIPAAEGL
KIAGLEVVTL AAKEGLALLN GTQASTAFSL EGLFHAEDLY AAGTVIGSIS VEAAMGSRAP
FDHRVHFVRG QKGQIDAARA YREVLTDSSE IAEAHVDCEK VQDPYSLRCQ PQVMGACLTQ
IRQAAEVLHV EANGVTDNPL VFANEGDFIS AGNFHAEPVA MAADNLALAI AEIGSLSERR
MALLIDSSLS KLPPFLVDNG GVNSGFMIAQ VTSAALASEN KSLAHPASVD SLPTSANQED
HVSMACFAGR RLADMSENTN GVLAVEYLAA VQGLDFRAPL KGSPLIEKAK AKLRETVSFY
DKDRYFAPDI VEASEIISDG YLNQYMPEGL LPSF