Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0908 |
Symbol | hutH |
ID | 3518752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 907180 |
End bp | 908724 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637283373 |
Product | histidine ammonia-lyase |
Protein accession | YP_267657 |
Protein GI | 71278652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCATA TTACTGAACT AAAAATTATT CCAGGGCAGT TAACGCTTGC TCAATTACGC GACGTAAACC GTTTTGACGG TATCAAATAC AGCTTAGATG AAAGTGCTTT TTCTGAGATT AATAAAAGTG CTAACGCAGT ACAGCAAGTG ATTAAAGATA ATCGTGTTGT TTACGGTATT AACACAGGTT TTGGCTTATT AGCCAGCACA CGCATTAAAA ATGAAGAGCT AGAATTATTG CAACGCTCTA TTGTTCTTTC ACACTCAGCA GGTTTTGGTG AGTACATGGA AGACTCAACA GTGCGTTTGA TGATGGTACT TAAAATAAAC TCACTTTCAC GTGGTTTTTC AGGTATTCGT TTACAAGTTA TTCAAGCATT AATTACCTTA TTAAATGCTG AAGTATACCC ATGTGTACCA AAGAAAGGTT CTGTAGGCGC TTCTGGTGAT TTAGCACCAC TTTCTCACAT GGTTTTACCT TTATTAGGTG AAGGCGAAAT GTCTTACCAA GATCAAGTGA TTCCAGCCGC TGAAGGATTA AAAATTGCAG GTCTTGAGGT AGTAACCCTA GCAGCAAAAG AAGGTTTAGC GTTATTAAAC GGCACACAAG CTTCTACAGC GTTTTCTTTA GAAGGTTTAT TCCATGCTGA AGACTTATAC GCTGCAGGTA CGGTAATTGG TTCTATTTCT GTAGAAGCCG CGATGGGCTC TCGTGCCCCG TTTGATCATC GTGTACATTT TGTCCGTGGT CAAAAAGGTC AAATTGATGC GGCACGTGCT TATCGTGAAG TATTAACTGA TAGCTCTGAA ATTGCTGAGG CACACGTTGA TTGTGAAAAA GTACAAGACC CTTATTCACT TCGTTGTCAG CCTCAAGTAA TGGGTGCTTG TTTAACACAA ATTCGTCAAG CGGCAGAAGT ATTGCACGTT GAAGCGAATG GCGTAACAGA TAACCCGTTA GTTTTCGCTA ACGAAGGTGA CTTTATCTCT GCCGGTAACT TCCATGCTGA GCCTGTTGCT ATGGCCGCTG ATAATTTAGC CTTAGCTATT GCTGAGATTG GTTCATTATC TGAACGTCGC ATGGCGTTAT TAATTGACTC AAGCTTAAGT AAACTACCAC CATTTTTAGT TGATAACGGT GGTGTTAACT CTGGCTTTAT GATCGCGCAA GTTACTTCTG CAGCATTAGC TTCAGAGAAT AAGTCACTTG CTCATCCAGC TTCAGTTGAT AGTTTACCAA CCTCTGCTAA TCAAGAAGAT CACGTATCTA TGGCATGTTT TGCTGGTCGT CGTTTAGCAG ACATGAGCGA GAATACTAAT GGCGTTCTTG CCGTTGAGTA CTTAGCCGCA GTGCAAGGTT TAGACTTTAG AGCTCCGCTT AAGGGCTCGC CTCTTATTGA AAAAGCAAAA GCTAAATTAC GTGAAACAGT TTCTTTCTAC GATAAAGACA GATACTTTGC ACCTGATATT GTTGAAGCAT CAGAAATTAT CTCTGATGGT TACTTGAATC AATATATGCC AGAAGGTTTA TTACCTAGCT TTTAA
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Protein sequence | MNHITELKII PGQLTLAQLR DVNRFDGIKY SLDESAFSEI NKSANAVQQV IKDNRVVYGI NTGFGLLAST RIKNEELELL QRSIVLSHSA GFGEYMEDST VRLMMVLKIN SLSRGFSGIR LQVIQALITL LNAEVYPCVP KKGSVGASGD LAPLSHMVLP LLGEGEMSYQ DQVIPAAEGL KIAGLEVVTL AAKEGLALLN GTQASTAFSL EGLFHAEDLY AAGTVIGSIS VEAAMGSRAP FDHRVHFVRG QKGQIDAARA YREVLTDSSE IAEAHVDCEK VQDPYSLRCQ PQVMGACLTQ IRQAAEVLHV EANGVTDNPL VFANEGDFIS AGNFHAEPVA MAADNLALAI AEIGSLSERR MALLIDSSLS KLPPFLVDNG GVNSGFMIAQ VTSAALASEN KSLAHPASVD SLPTSANQED HVSMACFAGR RLADMSENTN GVLAVEYLAA VQGLDFRAPL KGSPLIEKAK AKLRETVSFY DKDRYFAPDI VEASEIISDG YLNQYMPEGL LPSF
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